Transcript Information: R_Transcript_397736.p1


Annotated TAIR IDAT5G42905.1
Annotated Gene NamePolynucleotidyl transferase, ribonuclease H-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:17201414-17202323 | Reverse length=258
E-Value2E-24
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.18252960954719
Replicate 20.20996300416298
Replicate 30.45813475192305
Condition 2: 8 Hour
Replicate 10.36728797420868
Replicate 20.22360881841186
Replicate 30.18151610620387
Condition 3: 24 Hour
Replicate 10.34436710841556
Replicate 20.11027629445289
Replicate 30.10943852343449


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_397736.p1 GENE.R_Transcript_397736~~R_Transcript_397736.p1 ORF type:complete len:200 (+),score=29.62,RVT_3|PF13456.2|1.2e-19 R_Transcript_397736:15-614(+)
ATGGATGACTTACAAAGTGCTCTGCGTTCTGAAGACATGGAATTACAAGGCACTACACCTCCGAGGACACTCTCCCTAATCCAATGGACTCCCCCAAGAGATGGTTGGTTTAAACTAAACTGTGATGGAGCTGCAAGAGGCAACCCTGGCCAGACTGGGGGAGGAGGCGTGCTGCGTGATTCAAGGGGAAGATTTATCAAGGCCTTCTCTTCTAACTTTGGGATATGTTCTTCTTTTCATGCTGAGTTGCTAGCCCTGCATAAGGGAATACTACTAGCATGGGGAGAAGGGGTGCGCAATCTAGAAGTCGACCTGGACTCAATGGCAGTAGTAAACACAATGAAAGGTCACCCACCTCAACACCATCCACATTTTAATCTAATCATGCAATGCAGGAGGCTACTAGAAGTGGAAGACTGGGATGTATTCATATCTCATTGCTACAGGGAGGCTAACATGGTGGCTGATAAACTTGCTAATATGGGAGTTGACCAAAGCGTTTCCTTGGTACTTCATGACTCACCTCCAGCAGACTTGGGAAACTTGCTCAATCAGGATATACAAGGTGTCTCTAGGCCTAGGTCAATCATTAATCAGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_397736.p1 GENE.R_Transcript_397736~~R_Transcript_397736.p1 ORF type:complete len:200 (+),score=29.62,RVT_3|PF13456.2|1.2e-19 R_Transcript_397736:15-614(+)
MDDLQSALRSEDMELQGTTPPRTLSLIQWTPPRDGWFKLNCDGAARGNPGQTGGGGVLRDSRGRFIKAFSSNFGICSSFHAELLALHKGILLAWGEGVRNLEVDLDSMAVVNTMKGHPPQHHPHFNLIMQCRRLLEVEDWDVFISHCYREANMVADKLANMGVDQSVSLVLHDSPPADLGNLLNQDIQGVSRPRSIINQ*

Click here to download the sequence:
Link to NCBI Protein BLAST