Transcript Information: R_Transcript_397782.p1


Annotated TAIR IDAT4G34110.1
Annotated Gene Namepoly(A) binding protein 2
Annotated Gene Symbol(s)PAB2, PABP2, ATPAB2
Annotation TypeHomolog
Chromosome Positionchr4:16336732-16339892 | Forward length=629
E-Value1E-20
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.26517618820415
Replicate 20.50838499797332
Replicate 31.0538208579344
Condition 2: 8 Hour
Replicate 10.29643904294486
Replicate 20.43314056835226
Replicate 30.087901262084198
Condition 3: 24 Hour
Replicate 10.55587910962964
Replicate 20.26701281949851
Replicate 30.47697177283796


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_397782.p1 GENE.R_Transcript_397782~~R_Transcript_397782.p1 ORF type:5prime_partial len:413 (+),score=40.02,RRM_1|PF00076.18|3e-13,RRM_1|PF00076.18|1.3e-16,RRM_1|PF00076.18|2.8e-07,RRM_1|PF00076.18|5.6e-14,RRM_6|PF14259.2|3.9e-08,RRM_6|PF14259.2|2e-12,RRM_6|PF14259.2|0.00087,RRM_6|PF14259.2|3.2e-09,RRM_5|PF13893.2|3.1e-07,RRM_5|PF13893.2|0.073,RRM_5|PF13893.2|2.7e+02,RRM_5|PF13893.2|6e+02 R_Transcript_397782:2-1240(+)
TCTCCAGAAGTTGAAGAAAATGCTCTCCGAGAACATTTCTCCAAAGCCGGTGAAGTCCTTAACGTCAAAATCGTTAATAAAAATAACAATAGTTCCGCCCACGCTTTCGTTACTTATGCCAGTGAAGACAGCGCTCAAAAGGCCATTAACGAATTAAACATTTTTGGTGAAAACCAAATCGACGTCCAAAAGTCACACAGACTCAGCAGAAAAAGAAACGTCAGAAAAGGTCCCAATAGAAGAGTTCGAAACGGAAGAAGATTCAACAAAAAACCAGTTAACAAAAACGTTCGTGTTAACAATGACGAAAAAGAACTTTCTCCCACTACCTTATATGTCTCAAACATTCCTTTCTCATTTGATGACGAGAAATTAAGAGAACTCTTTGAAGGTTTCAAAATCAAAACCGCCCGCACTGTTACACGAAACGGAAAGAGCAGAGGCTACGGATTCGTTGAATTTGAAACTGAAGAAGATGCTAAAGCAGCTGTTGAGGCTAAGAAAGACCTTAAAATTGAGGATCGAGAAGTCAGTATCCGAAACGCCTACAAAATCGAGGAAGCTGCCCCCAAAACCAACTCCACTACCACTTTATACGTATCAAACCTCTCCTATAAATTATCTGACGAAGCATTTTCCGAACTCTTCAAAGGATACAATCTCGAGAAAGCCTATGTCGCCCGAACCAAGAAAGGAAGAAGCAAAGGTTTTGGATTTGTTGTCTTAGCTGGTGATAACACTGCTGCCACCCAAGAGAAAGTTATTGCTGAAAAAAACCAATCCAAAGTTGATGACAGAGAAATCTTTGTTCGACCTGCCTATAACACTCCAGAAAAGGTTGAACCTGAAAGCCAACCCGAATCCGTCGTTGAAGTCAAACAAATTGCTTTATACGTTTCCAATATTCCTTTCTCTGTAAACAGTGAAAACTTAGCTGATCTCTTTAAAGACGCCAAAGGTTTCCAAAGTGCTAACGTCGTTGCTGCCAAAAAGAACGGAAAAAGCAGAGGATACGGTTTCGTTATCTTCGATACTGAAGAAAACAGAGACAACGCATTAGAGGCCAAGAAAGACTCTAAATTAGAAGATCGACCACTCTCTATCTCTGTTGCTGTCGGAAAAAAATCAAACAAGGTTAACAACAGAGGTAACAACCAACGCCGACGAGGAGGAAACAGAAGATTTGGAAACCGAAGAGGTGGACGACGAGTTCATCGAGGTGACGATGACCAAGAATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_397782.p1 GENE.R_Transcript_397782~~R_Transcript_397782.p1 ORF type:5prime_partial len:413 (+),score=40.02,RRM_1|PF00076.18|3e-13,RRM_1|PF00076.18|1.3e-16,RRM_1|PF00076.18|2.8e-07,RRM_1|PF00076.18|5.6e-14,RRM_6|PF14259.2|3.9e-08,RRM_6|PF14259.2|2e-12,RRM_6|PF14259.2|0.00087,RRM_6|PF14259.2|3.2e-09,RRM_5|PF13893.2|3.1e-07,RRM_5|PF13893.2|0.073,RRM_5|PF13893.2|2.7e+02,RRM_5|PF13893.2|6e+02 R_Transcript_397782:2-1240(+)
SPEVEENALREHFSKAGEVLNVKIVNKNNNSSAHAFVTYASEDSAQKAINELNIFGENQIDVQKSHRLSRKRNVRKGPNRRVRNGRRFNKKPVNKNVRVNNDEKELSPTTLYVSNIPFSFDDEKLRELFEGFKIKTARTVTRNGKSRGYGFVEFETEEDAKAAVEAKKDLKIEDREVSIRNAYKIEEAAPKTNSTTTLYVSNLSYKLSDEAFSELFKGYNLEKAYVARTKKGRSKGFGFVVLAGDNTAATQEKVIAEKNQSKVDDREIFVRPAYNTPEKVEPESQPESVVEVKQIALYVSNIPFSVNSENLADLFKDAKGFQSANVVAAKKNGKSRGYGFVIFDTEENRDNALEAKKDSKLEDRPLSISVAVGKKSNKVNNRGNNQRRRGGNRRFGNRRGGRRVHRGDDDQE*

Click here to download the sequence:
Link to NCBI Protein BLAST