Transcript Information: R_Transcript_398137.p1


Annotated TAIR IDATMG00860.1
Annotated Gene NameDNA/RNA polymerases superfamily protein
Annotated Gene Symbol(s)ORF158
Annotation TypeHomolog
Chromosome PositionchrM:235916-236392 | Forward length=158
E-Value1E-10
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.50486913279009
Replicate 20.26803787765487
Replicate 30.097475479132564
Condition 2: 8 Hour
Replicate 10.15629275498242
Replicate 20.33303441040064
Replicate 30.38620448128483
Condition 3: 24 Hour
Replicate 10.39077118685454
Replicate 20.14077824823773
Replicate 30.27941750664124


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_398137.p1 GENE.R_Transcript_398137~~R_Transcript_398137.p1 ORF type:3prime_partial len:470 (+),score=83.57,RVT_1|PF00078.23|2.5e-35,Asp_protease_2|PF13650.2|1.4e-07,gag-asp_proteas|PF13975.2|1.6e-07 R_Transcript_398137:608-2014(+)
ATGTTGATGGTTCGTAGAATCTTACATTCAAAGGAAGGGCCGAAAGATCACACACAAAGAGAGAACATCTTCCATACAAGATGTACCATTCAAGGCAAGGTTTGCTCTATGATTGTTGATGGAGGAAGTTGTGCCAATGCAGCCTCCACCACACTTGTCGAAAAGCTTGGGTTATCCACCACCAAGCACCCTAATCCCTACAAGCTCCAATGGCTCAACAAAGGTAATGAGGTAAAGGTCACTAAACAAGTCTCTATTCCTTTCTCCATTGGAAACATCTATAGAGATGAGGTTATGTGTGATGTGATACCTATGGATGCTTGCCATGTTTTGTTGGGTAGGCCTTGGATGTATGATAGGTATGTTTGGCATAATGGTAGGGCTAACACCTACTCTCTGTTTGTAAGTGGAAGGAAGATTGTCCTAACCTCCCTAGAACCTAAGGACTTAATCAGCCATGGTGATCAATTGAAGGCTATGTTTATGGGTAGGGTGGAATTGTGTGATGTGTTTGCTTCTTGTGGCAATGTGTTGGCATTGGTTGTTGTAGAGGAGAATGAGACCCATGGGTTGGCCGAATTACCTAGTGAGGTGAAACCCCTTTTAGAAGAGTTTTGTGATGTGTTCCCAAATGAGTTACCTCAAGGACTCCCACCTATTAGGGGAATAGAGCACCAAATTGACTTGGTTCCAGGTGCTATTCTTCCTAACAAGCCCGCTTATAGGTGTACCCCTGAGGAGTCTAGAGAGTTACAAAGACAAGTGGATGAATTGTTGGAGAGGGGATATGTGAGGACTAGCATGAGTCCATGTTCGGTTCCTGCTTTGCTAGTGCCCAAGAAGGATGGGTCTATGAGGATGTGTGTGGATAGTAGAGCTATTAACAACATCACCATCAAATATAGGTATCCCATCCCAAGGCTTGATGATATGCTTGATGAGCTTCATGGGGCTCAAGTGTTCTCCAAGATTGACCTTAGGAGTGGGTACCATCAAATCCGAATGAGGCAAGGAGATGAGTGGAAAACCGCTTTTAAGACTAAGGGGGGACTATATGAATGGACTGTCATGCCATTTGGACTATCCAATGCTCCTAGTACCTTCATGAGGTTGATGAATGAGGTATTGCGCCCTTTCCTTGGTAAATTTGTTGTTGTTTATTTTGATGATATTTTGGTTTATTCTAAAGATGTTTGTAGCCATCTTGATCACCTGAGGCAAGTATTCAACACTTTGAGGCAACATCAACTCTATGCCAAGCTTGAGAAGTGTGAATTCATGTCTTCAAGTGTTACATTCTTGGGCTATGTGGTGTCAAGTCAAGGGATTTCTATGGATCCTAGCAAGGTTGAAGCTATCAAGAGTTGGCCTATTCCTACTACACTTACGGAGGTGAGATCATTTCAT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_398137.p1 GENE.R_Transcript_398137~~R_Transcript_398137.p1 ORF type:3prime_partial len:470 (+),score=83.57,RVT_1|PF00078.23|2.5e-35,Asp_protease_2|PF13650.2|1.4e-07,gag-asp_proteas|PF13975.2|1.6e-07 R_Transcript_398137:608-2014(+)
MLMVRRILHSKEGPKDHTQRENIFHTRCTIQGKVCSMIVDGGSCANAASTTLVEKLGLSTTKHPNPYKLQWLNKGNEVKVTKQVSIPFSIGNIYRDEVMCDVIPMDACHVLLGRPWMYDRYVWHNGRANTYSLFVSGRKIVLTSLEPKDLISHGDQLKAMFMGRVELCDVFASCGNVLALVVVEENETHGLAELPSEVKPLLEEFCDVFPNELPQGLPPIRGIEHQIDLVPGAILPNKPAYRCTPEESRELQRQVDELLERGYVRTSMSPCSVPALLVPKKDGSMRMCVDSRAINNITIKYRYPIPRLDDMLDELHGAQVFSKIDLRSGYHQIRMRQGDEWKTAFKTKGGLYEWTVMPFGLSNAPSTFMRLMNEVLRPFLGKFVVVYFDDILVYSKDVCSHLDHLRQVFNTLRQHQLYAKLEKCEFMSSSVTFLGYVVSSQGISMDPSKVEAIKSWPIPTTLTEVRSFH

Click here to download the sequence:
Link to NCBI Protein BLAST