Transcript Information: R_Transcript_398139.p1


Annotated TAIR IDATMG00860.1
Annotated Gene NameDNA/RNA polymerases superfamily protein
Annotated Gene Symbol(s)ORF158
Annotation TypeHomolog
Chromosome PositionchrM:235916-236392 | Forward length=158
E-Value1E-28
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.11776103841754
Replicate 20.054184001074318
Replicate 30.2068995653846
Condition 2: 8 Hour
Replicate 10.094783993344175
Replicate 20.11541100305128
Replicate 30.42158579505415
Condition 3: 24 Hour
Replicate 10.59245954136011
Replicate 20.17075039141092
Replicate 30.59308619151593


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_398139.p1 GENE.R_Transcript_398139~~R_Transcript_398139.p1 ORF type:5prime_partial len:775 (+),score=134.53,RVT_1|PF00078.23|4.5e-35 R_Transcript_398139:2-2326(+)
AACATCTTCCACTCTAGGTGCACAGTTCAAGGCAAAGTTTGTTCTTTGATCATTGATGGAGGAAGTTGTGCCAATGCCGCTTCTACTTACATGGTTGACAAATTAGGTTTTTCTACTTCAAAGCACCCCAATCCTTACAAGCTTCAATGGCTCAGCAAAGGGAATGAGGTAAAGGTTACTAAACAAGTCACTATTCCATTCTCTATTGGTTCTAGTTACAAGGATGAGGTTATTTATGATGTGATTCCTATGGATGCTTGTCATATACTTTTGGGTAGGCCTTGGTTGTTTGATAGGCAAGTGTCGCATAATGGTTACTTGAATACTTATTCCTTGTTCATGAAAGGCAAGAAAATCACCCTAGCCTCTTTGAAACCGAATGAAATCACAAAGCCGAATGTACAAGCTAAAGTGGGGGAGGGTTTGTTCATGTCAAAGGGGGAATTGTGTGACGCTTTTAGGAAGGGCAATGATGTGTTATGTTTGCTCATTGTTGAGGCTAATGAAACCCATGATATTGTTAAAATTCCTCTTTCCCTCAAACCTCTTCTTAGCAAGTTTTGTGATGTGTTTCCCGAAGATCTACCACCTGGTTTGCCTCCTATCCGAGGTATCGAGCATAAAATTGACTTTGTTCCAGGAGCTATACTGCCTAATAAGGCTGCCTATAGGTGTACCCCAAATGAGGCCAAAGAACTTCAAAGGCAAGTCGAAGAATTTGTTGAGAAAGGGTATGTGAGATCTAGTATGAGCCCTTGCTCGGTTCCGGCTCTATTGGTGCCTAAGAAGGATGGTTCTATGAGGATGTGTGTTGATAGTAGGGCCATCAATAATATCACCATCAAGTGTAAGTACCCCATCCCTAGGCTTGATGATATGTTGGATGAGCTTCATGGCTCCCAAGTCTTCTCCAAGATCGATCTTAGAAGCGGATATCATCAAATTCGTATGAAAGAGGGAGATGAGTGGAAAACCGCTTTCAAGACCAAGGGAGGTTTATATGAATGGAGGGTTATGCCATTTGGGTTGTCTAATGCCCCTAGCACATTCATGAGGCTTATGCATGAGGTTTTGAGGCCTTTTCTGGGAAAGTATGTTGTCGTTTATTTTGATGATATCCTTGTCCATTCAAAGAGCATTGAAGATCACCTATTTCACCTTGAGCAAGTCTTATCTACTTTGAGGCAACACAAGCTTTATGCTAAACTTGAGAAGTGTGAGTTCATGGCTCCAAGCATTACCTTTCTTGGCTATGTTGTTTCAAGCCAAGGCATCTCCATGGATCCTTCAAAGGTGGAAGCTATCAAGTCTTGGCCGGTTCCTACAACTATCACCGAGGTGAGGAGGTTTCACGGCCTAGCCTCTTTCTACAGGCGCTTCATCAAGAACTTCTCTTCAATTGTGGCTCCTATCACCGATTGCTTGAAAAAAGGGGCATTCACTTGGTCTCAAGCTGCCAATGAAGCCTTTAAGTTTTTAAAGAACAAGTTGAGTTCAGCTCCTATTCTTTCTCTCCCCGACTTTGAAGATCTGTTTGAGCTTGAGTGTGATGCTAGTGGTGTTGGCATTGGGGCTGTCCTGGTCCAAAAAGACAAGCCGGTGGCATTCTCTAGTGAGAAGCTTAATGGTTCGAGGCTCAATTATAGCACCTATGATAAGGAATTCTATGCTATTATCCGTGCTATGACTCATTGGGCTCATTATCTTAGGCCTAAGCAATTTGTTTTGTATTCCGATCATAAAGCTCTGAAGTACATTAATGGCCAACACAAGTTGAATCCAAGGCATGCAAAGTGGATTGAGTTCCTTCAAACCTTTTCTTTTGTGTCCAAACACAAGTCTGGGAAGACCAATGTGATAGCAGATGTTCTCTCAAGGCGCTATAACATGCTATCTATCTTGGAAACTCAGGTCTTAGGCTTCTCATTAATCAAGGAATTCTACACCCATGATCCGGATTTTTCTTCTCTTCTTCTATATGACAATCTTGACAAACATGGGTCTTTTGTTATCCAAGATGGGTTTATTTTCAAAGGAAACAAGCTATGTGTTCCAAGGGCTTCTATACGGGACTTGTTGATTAGAGAGGTGCATGGTGGGGGTATGGCTGGTCATTTTGGCATAAACACGACCTATGGCATATTGAGTGAGCATTTCTATTGGCCTCACATGTTGGGAGATGTCCAAGCCATCATTTCGAGATGTTCAATTTGCCATCAAGTGAAGTCTCAGTTCCATCAAGGCCTTTGCATGTCATTGCCGGTTCCAAATCATCCTTGGGAGCATCTTAGCATGGACTTCATCATGGCTCTCCCTAGAACTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_398139.p1 GENE.R_Transcript_398139~~R_Transcript_398139.p1 ORF type:5prime_partial len:775 (+),score=134.53,RVT_1|PF00078.23|4.5e-35 R_Transcript_398139:2-2326(+)
NIFHSRCTVQGKVCSLIIDGGSCANAASTYMVDKLGFSTSKHPNPYKLQWLSKGNEVKVTKQVTIPFSIGSSYKDEVIYDVIPMDACHILLGRPWLFDRQVSHNGYLNTYSLFMKGKKITLASLKPNEITKPNVQAKVGEGLFMSKGELCDAFRKGNDVLCLLIVEANETHDIVKIPLSLKPLLSKFCDVFPEDLPPGLPPIRGIEHKIDFVPGAILPNKAAYRCTPNEAKELQRQVEEFVEKGYVRSSMSPCSVPALLVPKKDGSMRMCVDSRAINNITIKCKYPIPRLDDMLDELHGSQVFSKIDLRSGYHQIRMKEGDEWKTAFKTKGGLYEWRVMPFGLSNAPSTFMRLMHEVLRPFLGKYVVVYFDDILVHSKSIEDHLFHLEQVLSTLRQHKLYAKLEKCEFMAPSITFLGYVVSSQGISMDPSKVEAIKSWPVPTTITEVRRFHGLASFYRRFIKNFSSIVAPITDCLKKGAFTWSQAANEAFKFLKNKLSSAPILSLPDFEDLFELECDASGVGIGAVLVQKDKPVAFSSEKLNGSRLNYSTYDKEFYAIIRAMTHWAHYLRPKQFVLYSDHKALKYINGQHKLNPRHAKWIEFLQTFSFVSKHKSGKTNVIADVLSRRYNMLSILETQVLGFSLIKEFYTHDPDFSSLLLYDNLDKHGSFVIQDGFIFKGNKLCVPRASIRDLLIREVHGGGMAGHFGINTTYGILSEHFYWPHMLGDVQAIISRCSICHQVKSQFHQGLCMSLPVPNHPWEHLSMDFIMALPRT*

Click here to download the sequence:
Link to NCBI Protein BLAST