Transcript Information: R_Transcript_398269.p2


Annotated TAIR IDAT1G57860.1
Annotated Gene NameTranslation protein SH3-like family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:21430034-21430827 | Reverse length=164
E-Value6.1E-50
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.74501881447832
Replicate 20.21424796343161
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_398269.p2 GENE.R_Transcript_398269~~R_Transcript_398269.p2 ORF type:3prime_partial len:98 (+),score=-8.50,Ribosomal_L21e|PF01157.14|1.3e-43 R_Transcript_398269:14-304(+)
ATGCCACACAGCTACGGTTATCGAGCTCGCACCCGCCACCTGTTTTCTCAGAAGTTCCGCAAACATGGTCCCGTTCACTTGAGCGACTACCTGACCGTGTACAAGGTCGGAGACTACGTTGACATCAAGGCCAACGCCTCCATCCACAAGGGTATGCCCCACAAGTTCTACCACGGTAAGACCGGTAGAGTGTGGAACATCAGCCCTCGCGCTGTTGGCGTTGAGATCAACAAACAAGTCGGGAACCGTTACATCACCAAGCGCATCCACGTCCGCATTGAGCACGTCAAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_398269.p2 GENE.R_Transcript_398269~~R_Transcript_398269.p2 ORF type:3prime_partial len:98 (+),score=-8.50,Ribosomal_L21e|PF01157.14|1.3e-43 R_Transcript_398269:14-304(+)
MPHSYGYRARTRHLFSQKFRKHGPVHLSDYLTVYKVGDYVDIKANASIHKGMPHKFYHGKTGRVWNISPRAVGVEINKQVGNRYITKRIHVRIEHVK

Click here to download the sequence:
Link to NCBI Protein BLAST