Transcript Information: R_Transcript_39827.p1


Annotated TAIR IDAT4G39090.1
Annotated Gene NamePapain family cysteine protease
Annotated Gene Symbol(s)RD19, RD19A
Annotation TypeHomolog
Chromosome Positionchr4:18215826-18217326 | Reverse length=368
E-Value2E-53
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.9817500465123
Replicate 21.3197674547387
Replicate 30.065447821703293
Condition 2: 8 Hour
Replicate 10.41975768480992
Replicate 20.70277057215155
Replicate 30.15558523388903
Condition 3: 24 Hour
Replicate 10.13118746987259
Replicate 20.1260300508033
Replicate 30.18760889731626


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_39827.p1 GENE.R_Transcript_39827~~R_Transcript_39827.p1 ORF type:5prime_partial len:350 (+),score=65.42,Peptidase_C1|PF00112.19|1.7e-61,Inhibitor_I29|PF08246.8|2.4e-12,Peptidase_C1_2|PF03051.11|0.31,Peptidase_C1_2|PF03051.11|0.0097 R_Transcript_39827:1-1050(+)
GAAAGTATGAAGCGAGCACTGTTTATCTTGGCGTTGATATTCCTCATTTTTGTTTTCAGAGCTGAGGCGACCGATTCACAAGCTAAAAGACAAGAATTTTTGGACAAGATAGCCAAAACTCACTTCAACTCATTCAAACTGAAATATAAGAAGACATATAAATCAGCAAATGAGGAGGACATGAGACTCAAAATATTCACTAAAAACCTTCAAAGAATCGCAAAGATGAATCTTGCTTCCCAAAACGCAAATAACTATGGAATCACCCAATTCTCTGATTTGACACCCTCTGAATTCAGCCATATGTATTTGATGCCAAAAAGACCAGCACCTATCATCTCTGAATCATCTTTGTTGAAAACAAATTTTGAGGGAGTAAAGCTTCCAGAGGCATGGGATTGGAGATATAATGGAACAGTAAATGGAGAATCCTGCATTACACCAGTCAAGAATCAAGGGCAATGTGGATCTTGTTGGGCATTTTCTGCTACTGAAGAAATCGAGTCCATGAACTTTCTCGAGAAGAACAGTGGAGATAAGCCAAAGCATTTGTCAGTCCAACAAATCGTTGATTGTGACACCAAGGCTTACGGATGTCAAGGAGGATGGACTTACCTCGCTTACGAATACATAGAGAAGGCAGGAGGACAAGATTCTCAAAAGAGCTACGAATATACTGGAAAGGATGGAAAATGTGACTTTAAGAAGGATTCTGTAGAAGCAAAGATTGAATCATGGAGCTATGTAACAAAAGACAAAAATGAAAATGTGATGAAGAATTTCATTGGAACCACTGGACCATTGTCTATCTGTGTTGATGCTGCATCTTGGCAATTTTACAACAGTGGAGTCATCAAAACTTGTGGAAAGGAACTCGATCATTGTGTTCAACTTGTCGGGTATACCAAAGCAGATGGAGTCGATGCTTGGGTTGTCAGAAACAGTTGGGGTGAATCCTGGGGTTTGAAAGGTTACATCCTTTTGGAATTTGGAAAGAACATGTGTGGTATTGCTGATGTTGTCACCACTGTCAAGGGAAAGGCTCTTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_39827.p1 GENE.R_Transcript_39827~~R_Transcript_39827.p1 ORF type:5prime_partial len:350 (+),score=65.42,Peptidase_C1|PF00112.19|1.7e-61,Inhibitor_I29|PF08246.8|2.4e-12,Peptidase_C1_2|PF03051.11|0.31,Peptidase_C1_2|PF03051.11|0.0097 R_Transcript_39827:1-1050(+)
ESMKRALFILALIFLIFVFRAEATDSQAKRQEFLDKIAKTHFNSFKLKYKKTYKSANEEDMRLKIFTKNLQRIAKMNLASQNANNYGITQFSDLTPSEFSHMYLMPKRPAPIISESSLLKTNFEGVKLPEAWDWRYNGTVNGESCITPVKNQGQCGSCWAFSATEEIESMNFLEKNSGDKPKHLSVQQIVDCDTKAYGCQGGWTYLAYEYIEKAGGQDSQKSYEYTGKDGKCDFKKDSVEAKIESWSYVTKDKNENVMKNFIGTTGPLSICVDAASWQFYNSGVIKTCGKELDHCVQLVGYTKADGVDAWVVRNSWGESWGLKGYILLEFGKNMCGIADVVTTVKGKAL*

Click here to download the sequence:
Link to NCBI Protein BLAST