Transcript Information: R_Transcript_398276.p1


Annotated TAIR IDAT1G05750.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)PDE247, CLB19
Annotation TypeHomolog
Chromosome Positionchr1:1721523-1723025 | Forward length=500
E-Value8E-20
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.27867115961403
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20.34138750902573
Replicate 30.13856191313273
Condition 3: 24 Hour
Replicate 10.1752504368527
Replicate 20
Replicate 30.16708171516716


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_398276.p1 GENE.R_Transcript_398276~~R_Transcript_398276.p1 ORF type:3prime_partial len:131 (-),score=10.36,PPR_2|PF13041.2|2.2e-09,PPR_2|PF13041.2|1.3e+04 R_Transcript_398276:2-391(-)
ATGAACCTTCCCGCCAGACCACCAACTACCCAACTCCAACAACCTGTTCTTCCTTCAAATCCAAGCCAACCCACCTTCCCCAAATCAACTCACAACAACTTTAATCCCACTAAATCTAAAAATGTCTCTCTTAGACATTTTCACAAACAGGTTGCCCCCATTGTCTCTTGGACCAACGCCATCGCTCGTCACTGCCAAAATGGCAACCTCTCTGAAGCTGCCACCGAATTCGCCCGAATGAGACTTTCGGGTGTCGAACCGAATCACATTACTTTCATAACTCTTCTCTCTGGCTGTGCCCATTTCCCATCAAAAGGCCGGTCATTTGGGCCTATAATTCATGCCTATGTCAGAAAATTGGGGTTGGATAAGCATAATGTTAAGGTGGGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_398276.p1 GENE.R_Transcript_398276~~R_Transcript_398276.p1 ORF type:3prime_partial len:131 (-),score=10.36,PPR_2|PF13041.2|2.2e-09,PPR_2|PF13041.2|1.3e+04 R_Transcript_398276:2-391(-)
MNLPARPPTTQLQQPVLPSNPSQPTFPKSTHNNFNPTKSKNVSLRHFHKQVAPIVSWTNAIARHCQNGNLSEAATEFARMRLSGVEPNHITFITLLSGCAHFPSKGRSFGPIIHAYVRKLGLDKHNVKVG

Click here to download the sequence:
Link to NCBI Protein BLAST