Transcript Information: R_Transcript_39845.p1


Annotated TAIR IDAT3G54540.1
Annotated Gene Namegeneral control non-repressible 4
Annotated Gene Symbol(s)ATGCN4, GCN4
Annotation TypeOrtholog
Chromosome Positionchr3:20190393-20192564 | Forward length=723
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 152.654722087432
Replicate 236.597718086742
Replicate 347.117886638753
Condition 2: 8 Hour
Replicate 150.604120890973
Replicate 265.685090408483
Replicate 370.841702560121
Condition 3: 24 Hour
Replicate 161.539677707596
Replicate 253.606532025709
Replicate 363.170347693573


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_39845.p1 GENE.R_Transcript_39845~~R_Transcript_39845.p1 ORF type:complete len:720 (+),score=210.47,ABC_tran|PF00005.23|5.3e+03,ABC_tran|PF00005.23|1.3e-24,ABC_tran|PF00005.23|4.5e+03,ABC_tran|PF00005.23|5.4e-25,AAA_21|PF13304.2|2.8e+03,AAA_21|PF13304.2|0.19,AAA_21|PF13304.2|0.05,AAA_21|PF13304.2|0.0033,AAA_21|PF13304.2|7.3e-05,SMC_N|PF02463.15|2.3,SMC_N|PF02463.15|0.84,SMC_N|PF02463.15|0.27,SMC_N|PF02463.15|0.069,DUF258|PF03193.12|0.079,DUF258|PF03193.12|0.00016,AAA_29|PF13555.2|0.069,AAA_29|PF13555.2|0.0025,AAA_17|PF13207.2|0.58,AAA_17|PF13207.2|9.4e+03,AAA_17|PF13207.2|0.0061,AAA_17|PF13207.2|9.8e+03,MMR_HSR1|PF01926.19|11,MMR_HSR1|PF01926.19|0.001,AAA_28|PF13521.2|0.11,AAA_28|PF13521.2|0.07,AAA_16|PF13191.2|2.6,AAA_16|PF13191.2|0.012 R_Transcript_39845:204-2363(+)
ATGGGGAAGAAGAAACCTGACAACTCTGGAGCTGGTATGAAATCTCAAAGCGGCACTTCTAAAGACGGGAAGAAAGAGAAGTTTTCTGTTTCAGCCATGCTTGCTAGCATGGACCAAAAACCTGACAAAACAACAAAGAAAGCATCTACTTCTAGTAAGCCCAAGGCAAAGGCGCCGCCTAAAATTTCGTCGTATACTGATGACATTGATCTCCCTCCTTCGGATGATGAGGAAGAGTATGGTTCTGAAGAAGAGAAGCTCGAAGAAATTCAAAAGCGGAATCAGCAGAGGTCAGAACCTAAGCTGCTCGAGACTTCAATTACTGGTAAGGAGTTGAAGAAGCGAGAGAAGAAAGACATGATGGCTGCTCATGCTGCTGAGATGGCCAAAAAAGAGGCCTTGAAGGATGACCATGATGCCTTCACTGTTGTCATTGGTAGTAAGGCTTCTGCTCTTGATGGTGGAGACGAAGCAGATGCTAACATCAAGGATATTGCACTTGAAAATTTCTCTGTGTCTGCTCGTGGAAAAGAACTACTGAAGAATGCATCCGTAAAGATCTCTCATGGAAAGAGGTATGGTTTGGTTGGACCAAATGGAAAGGGAAAGTCTACACTTCTGAAGCTTCTAGCCTGGAGAAAGGTTCCCGTGCCCAAAAATATAGATGTGCTTCTGGTCGAGCAAGAGGTGGTGGGTGACGATAAAACAGCTTTGGAAGCAGTTGTTGCAGCTAATGAAGAGCTGATGAGGCTCAGACAAGAAGTGGCTGCTTTGCAGAATTCTTCTGCTACAGAGGACACTGCAGATGGGGATGATGCTGGAGAGAGACTAGCTGAATTATATGAGAATCTTAATTTGTTGGGCTCAGATGCTGCTGAGGCCCAAGCTTCCAAGATTCTGGCTGGTTTGGGATTCACGAAAGATATGCAGGGCCGTCCTACCAAGTCATTCAGTGGTGGATGGAGAATGAGAATCTCACTTGCTAGGGCACTTTTTGTACAGCCCACTCTTCTGTTGTTAGATGAGCCCACCAATCATCTTGATCTTAGAGCGGTTCTTTGGCTGGAAGAGTACCTGTGTCGCTGGAAGAAAACTCTCATTGTCGTCTCCCATGACCGTGACTTCTTGAACTCAGTCTGTGACGAAATCATCCATCTTCATGACATGAAGCTTCACTTATACCGTGGCAATTTCGATGATTTTGAGATTGGATACGAGCAGCGCCGAAAAGAAATGAATAAAAAGTATGAAGTCTATGAAAAGCAAATGAAGGCTGCCAAAAGGTCAGGCAACCAGGCGCAACAGCAGAAGGTGAAGGAGAGGGCAAAGTTTGCTGCTGCCAAAGAAGCGTCCAAGAAAAAGGCAAAGGGGAAGGTGGACGAGGACGAGCCCTTGCAAGAAGCTCCAAGCAAATGGAGAGATTACACAGTTGAGTTCCACTTCCCTGAACCAACTGAGCTCACTCCCCCACTCCTACAGCTCATCGAAGTCAGCTTCAGCTACCCCAATCGGCCAGATTTCAGGCTATCAAATGTTGATGTTGGTATCGACATGGGTACCCGTGTTGCTATCGTGGGGCCTAATGGTGCAGGCAAATCAACCCTACTCAATCTTTTAGCAGGTGACTTGGCCCCTACAGAAGGCGAGGTAAGGAGGAGTCAGAAGCTGAGAATAGGAAGATACTCCCAGCACTTTGTGGATCTGTTGACAATGGACGAAACCCCTGTCCAGTATCTCCTCCGACTCCACCCTGAACAAGAAGGGATGAGTAAGCAAGAGGCTGTCCGAGCTAAACTTGGAAAGTTTGGACTCCCGAGCCATAACCACCTCACCCCGATTGCAAAACTATCTGGAGGCCAGAAATCTCGTGTTGTTTTTACATCCATATCGATGTCAAAACCTCACATCCTGTTGTTGGACGAACCTACCAATCACTTGGATATGCAGAGTATAGATGCACTTGCAGATGCTTTGGATGAGTTCACTGGGGGTGTAGTATTGGTTAGCCATGATTCTCGATTGATTTCACGCGTTTGCGAGGATGAAGAGAAGAGCCAACTTTGGATCGTAGAAGATGGGACTGTTAGAACGTTTCCAGGATCGTTCGAAGAGTACAAGGAGGATCTTCAGAAGGAAATCAAGGCTGAAGTTGATGACTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_39845.p1 GENE.R_Transcript_39845~~R_Transcript_39845.p1 ORF type:complete len:720 (+),score=210.47,ABC_tran|PF00005.23|5.3e+03,ABC_tran|PF00005.23|1.3e-24,ABC_tran|PF00005.23|4.5e+03,ABC_tran|PF00005.23|5.4e-25,AAA_21|PF13304.2|2.8e+03,AAA_21|PF13304.2|0.19,AAA_21|PF13304.2|0.05,AAA_21|PF13304.2|0.0033,AAA_21|PF13304.2|7.3e-05,SMC_N|PF02463.15|2.3,SMC_N|PF02463.15|0.84,SMC_N|PF02463.15|0.27,SMC_N|PF02463.15|0.069,DUF258|PF03193.12|0.079,DUF258|PF03193.12|0.00016,AAA_29|PF13555.2|0.069,AAA_29|PF13555.2|0.0025,AAA_17|PF13207.2|0.58,AAA_17|PF13207.2|9.4e+03,AAA_17|PF13207.2|0.0061,AAA_17|PF13207.2|9.8e+03,MMR_HSR1|PF01926.19|11,MMR_HSR1|PF01926.19|0.001,AAA_28|PF13521.2|0.11,AAA_28|PF13521.2|0.07,AAA_16|PF13191.2|2.6,AAA_16|PF13191.2|0.012 R_Transcript_39845:204-2363(+)
MGKKKPDNSGAGMKSQSGTSKDGKKEKFSVSAMLASMDQKPDKTTKKASTSSKPKAKAPPKISSYTDDIDLPPSDDEEEYGSEEEKLEEIQKRNQQRSEPKLLETSITGKELKKREKKDMMAAHAAEMAKKEALKDDHDAFTVVIGSKASALDGGDEADANIKDIALENFSVSARGKELLKNASVKISHGKRYGLVGPNGKGKSTLLKLLAWRKVPVPKNIDVLLVEQEVVGDDKTALEAVVAANEELMRLRQEVAALQNSSATEDTADGDDAGERLAELYENLNLLGSDAAEAQASKILAGLGFTKDMQGRPTKSFSGGWRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRWKKTLIVVSHDRDFLNSVCDEIIHLHDMKLHLYRGNFDDFEIGYEQRRKEMNKKYEVYEKQMKAAKRSGNQAQQQKVKERAKFAAAKEASKKKAKGKVDEDEPLQEAPSKWRDYTVEFHFPEPTELTPPLLQLIEVSFSYPNRPDFRLSNVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLAPTEGEVRRSQKLRIGRYSQHFVDLLTMDETPVQYLLRLHPEQEGMSKQEAVRAKLGKFGLPSHNHLTPIAKLSGGQKSRVVFTSISMSKPHILLLDEPTNHLDMQSIDALADALDEFTGGVVLVSHDSRLISRVCEDEEKSQLWIVEDGTVRTFPGSFEEYKEDLQKEIKAEVDD*

Click here to download the sequence:
Link to NCBI Protein BLAST