Transcript Information: R_Transcript_39852.p1


Annotated TAIR IDAT2G29900.1
Annotated Gene NamePresenilin-2
Annotated Gene Symbol(s)PS2
Annotation TypeOrtholog
Chromosome Positionchr2:12749837-12751030 | Forward length=397
E-Value1.3E-40
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.289570015226
Replicate 21.902103870466
Replicate 32.7935045848966
Condition 2: 8 Hour
Replicate 12.132915065091
Replicate 23.2723241718808
Replicate 33.288793561882
Condition 3: 24 Hour
Replicate 14.3995797823126
Replicate 23.0739036781292
Replicate 34.4232992050176


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_39852.p1 GENE.R_Transcript_39852~~R_Transcript_39852.p1 ORF type:5prime_partial len:287 (+),score=86.86,Presenilin|PF01080.13|9.8e-44 R_Transcript_39852:2-862(+)
GGTGGGGGTGTTTTGGGTCTTTTGGTTGGTGGGGTTTCGGATAATCAAGCCGTTCAGGTTCAGAACTTGTCTAGGAATGATGGGCACAATGGGTTTGGTACTGGTGGTGGTGCGGTTTCGGATAATCGGTCTGTTGAGCTTCAGAATTTGTCTAGGAATGATGGGCACAATGGGTTTGGTACTGGTGGTGGTGCGGTTTCGGATAATCGGTCTGTTGAGCTTCAGAATTTGTCTAGGAATGATGGGCACAATAGGGTTGCTAGTGATGGTGGGGGTGTTTTGGGTCTTTTGGTTGGTGGGGTTTCGGATAATCGGTCCATGGAGCTTCAAAACTTGTCTAGGAATGATGTGCGCAATAGGGTTGGTAATGTTGGTGGTGGGGATGATAATGGGAATGCAAGTGGGTCTAATGAGGAAATTGAGGATGATGATGATGTGGAAGGGAGAGGGGAAATGTCACCATTGGTGCCAAACTCGTGGGGGCCGCCTGAGATGTCACCCGGGGTGGTGAACGAGGAACAGTCACCCCTTGTGGAGATGCTTGCAGGAGGAATGTTAAATGAGGATGATGATTCAGAGTTGGCTACGAAGAGTCGAGGTATTAAGCTTGGTCTTGGAGATTTCGTTTTCTATAGTGTGCTTGTGGGTAGGGCTGCAATGTATGATCTTATGACTGTGTATGCTTGCTACCTTGCTATTATCTCTGGCCTTGCTTGTACCCTCATTTTGTTGTCCGTGTGCGGCCGTGCTCTTCCTGCTTTGCCTATTTCCATCATTTTAGGGATCATTTTTTACTTCCTAACTCGATTGTTAATGGAGCCTTTTGTTGTTCAGACATCCACGAATTTGTTGATGTTCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_39852.p1 GENE.R_Transcript_39852~~R_Transcript_39852.p1 ORF type:5prime_partial len:287 (+),score=86.86,Presenilin|PF01080.13|9.8e-44 R_Transcript_39852:2-862(+)
GGGVLGLLVGGVSDNQAVQVQNLSRNDGHNGFGTGGGAVSDNRSVELQNLSRNDGHNGFGTGGGAVSDNRSVELQNLSRNDGHNRVASDGGGVLGLLVGGVSDNRSMELQNLSRNDVRNRVGNVGGGDDNGNASGSNEEIEDDDDVEGRGEMSPLVPNSWGPPEMSPGVVNEEQSPLVEMLAGGMLNEDDDSELATKSRGIKLGLGDFVFYSVLVGRAAMYDLMTVYACYLAIISGLACTLILLSVCGRALPALPISIILGIIFYFLTRLLMEPFVVQTSTNLLMF*

Click here to download the sequence:
Link to NCBI Protein BLAST