Transcript Information: R_Transcript_39861.p1


Annotated TAIR IDAT1G48720.1
Annotated Gene Nameunknown protein; Has 229 Blast hits to 229 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 228; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:18018148-18018441 | Forward length=97
E-Value4E-11
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.0281067727465
Replicate 20.16663730489125
Replicate 31.4543960378509
Condition 2: 8 Hour
Replicate 10.58299678445822
Replicate 21.9521404781987
Replicate 31.5846644192401
Condition 3: 24 Hour
Replicate 10.91102409633746
Replicate 21.2252921605876
Replicate 31.042271651757


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_39861.p1 GENE.R_Transcript_39861~~R_Transcript_39861.p1 ORF type:3prime_partial len:126 (+),score=23.92,UBN2_3|PF14244.2|1.6e-07,DUF4219|PF13961.2|2.8e-07,UBN2|PF14223.2|1.1e+03,UBN2|PF14223.2|8.5e-06 R_Transcript_39861:235-609(+)
ATGGCAAGCAACGGTACCAATCCATCATCTCAACCCTTAATTCCTATTTTTAAAGGACAAAATTATCACTTGTGGAGTCTTAAGATGAAGACTCTCTTCAAGTCTCAAGAGCTTTGGGACTTGGTTGAGATTGGGTATGCAGAACCCAAAACAGCACCGACGGAACCCGATCAACAACTACGGGACAACCTAAAGAAGGATGCAAAGGCTCTTTTGTTCATTCAATCAGCATTGGATGATGAAATATTTCCCAGAATTGCAGCTTCCGCAACCGTAAAGGAGGCATGGGATGTTCTCAAGCAAGAGTATTTGGGTGATAAGAAGGCAATTACAGTTAAACGCCAATCTCTACGTCGTGATTTTGAAAATTTGAGC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_39861.p1 GENE.R_Transcript_39861~~R_Transcript_39861.p1 ORF type:3prime_partial len:126 (+),score=23.92,UBN2_3|PF14244.2|1.6e-07,DUF4219|PF13961.2|2.8e-07,UBN2|PF14223.2|1.1e+03,UBN2|PF14223.2|8.5e-06 R_Transcript_39861:235-609(+)
MASNGTNPSSQPLIPIFKGQNYHLWSLKMKTLFKSQELWDLVEIGYAEPKTAPTEPDQQLRDNLKKDAKALLFIQSALDDEIFPRIAASATVKEAWDVLKQEYLGDKKAITVKRQSLRRDFENLS

Click here to download the sequence:
Link to NCBI Protein BLAST