Transcript Information: R_Transcript_398659.p2


Annotated TAIR IDAT1G56340.1
Annotated Gene Namecalreticulin 1a
Annotated Gene Symbol(s)CRT1, CRT1a, AtCRT1a
Annotation TypeHomolog
Chromosome Positionchr1:21090059-21092630 | Reverse length=425
E-Value3E-57
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.3775819588467
Replicate 20.87154454558218
Replicate 30.9508457115384
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_398659.p2 GENE.R_Transcript_398659~~R_Transcript_398659.p2 ORF type:5prime_partial len:265 (+),score=23.88,Calreticulin|PF00262.14|4.5e-38,Calreticulin|PF00262.14|8.1e-24 R_Transcript_398659:2-796(+)
GGCGACTCGGAGTACTTCCTGATGTTCGGCCCTGACCAGTGCGGCTACACCAAGAAGGTGCACATCATCTTCGGCTACAAGGGCAAGAACCTGCTGTGGAAGAAGGAGCCCCGCTACCCCGATGACAAGCTCACGCACGTGTACACCCTCGTTGTCAAGGCCGACAACACGTACGAGCTGTACATCGACCAGGAGAAGAAGGAGTCTGGCTCGCTCGAGCAGGACTGGGCCTTCCTTGAGCCCAAGGAGATCGACGATGTCAACGACAAGAAGCCGAGCGACTGGGTCGATGACGCGATGATGGACGACCCCGCGGACACCAAGCCGGCCGACTGGGACAGCGAACCCGAGAAGATTGTGGACCCCGACGCGAAGAAGCCCGAGGACTGGGATGAGGAGGAGGATGGCAAGTGGGAGGCCCCGACGATCCCCAACCCCAAGCACAAGGGCGAGTGGAAGCCCAAGCGCATCCCCAACCCCGCGTTCAAGGGTCAGTGGAAGCCCAAGCAGGTCCCCAACCCCGCGTACGTCGCCGATGCTGAGCTGTACAAGGCTCGCAAGCCCCTGGCTGGCCTCGGCATCGATGTGTGGCAGGTCAAGTCCGGCTCCGTCTTCGACAACATCATCGTTGCGGATGACCTCGACGAGGTGAATGCCATCATCGACAAGACGTGGAAGGCGACGAAGGACGCCGAGAAGGCCGCGCTCGACGCGAAGGAGAAGACCGCGGAGCCCAAGGCGGAGGAGTCCAAGGAGGAGGACGCGAAGGACGACGATGACAAGGAGGAGCTCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_398659.p2 GENE.R_Transcript_398659~~R_Transcript_398659.p2 ORF type:5prime_partial len:265 (+),score=23.88,Calreticulin|PF00262.14|4.5e-38,Calreticulin|PF00262.14|8.1e-24 R_Transcript_398659:2-796(+)
GDSEYFLMFGPDQCGYTKKVHIIFGYKGKNLLWKKEPRYPDDKLTHVYTLVVKADNTYELYIDQEKKESGSLEQDWAFLEPKEIDDVNDKKPSDWVDDAMMDDPADTKPADWDSEPEKIVDPDAKKPEDWDEEEDGKWEAPTIPNPKHKGEWKPKRIPNPAFKGQWKPKQVPNPAYVADAELYKARKPLAGLGIDVWQVKSGSVFDNIIVADDLDEVNAIIDKTWKATKDAEKAALDAKEKTAEPKAEESKEEDAKDDDDKEEL*

Click here to download the sequence:
Link to NCBI Protein BLAST