Transcript Information: R_Transcript_39866.p4


Annotated TAIR IDAT3G20980.1
Annotated Gene NameGag-Pol-related retrotransposon family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:7355963-7357966 | Forward length=405
E-Value2E-05
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.9273616625492
Replicate 20.79231322325653
Replicate 30.86440519230764
Condition 2: 8 Hour
Replicate 10
Replicate 20.42190343096577
Replicate 30.68496643850517
Condition 3: 24 Hour
Replicate 10.64974926116144
Replicate 20.83227392039914
Replicate 31.8583900205856


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_39866.p4 GENE.R_Transcript_39866~~R_Transcript_39866.p4 ORF type:complete len:106 (+),score=14.41 R_Transcript_39866:1072-1389(+)
ATGGCTCATTCTTATGTTCCAAATGTCTCGAATGATGTGTTGTTTATAGATAGTGGGTGCTCCAATCACATGTGTGGTGCGAAGGCTTTATTCAGACATCTTGATGAGTCTAAGCAGAGTGAAGTTCGACTCAGAGATGATAAGAAAATTCATGTCGCAGGAAAGGGTACCATTGCCATCAATACAACCAAGGGTAATGTAAAGCTTCTCTATGATGTTCAGTACGTTCCTACCTTTGCTTATAACTTGTTAAGTGTTGGGCAGCTCATGAGTTCTGGTTATTCAATTGTGTTTGATAATGATTGTTGTGTTGTATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_39866.p4 GENE.R_Transcript_39866~~R_Transcript_39866.p4 ORF type:complete len:106 (+),score=14.41 R_Transcript_39866:1072-1389(+)
MAHSYVPNVSNDVLFIDSGCSNHMCGAKALFRHLDESKQSEVRLRDDKKIHVAGKGTIAINTTKGNVKLLYDVQYVPTFAYNLLSVGQLMSSGYSIVFDNDCCVV*

Click here to download the sequence:
Link to NCBI Protein BLAST