Transcript Information: R_Transcript_3987.p1


Annotated TAIR IDAT5G62600.1
Annotated Gene NameARM repeat superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:25123337-25132473 | Reverse length=958
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.9348808718267
Replicate 22.3574793449878
Replicate 33.2953552331307
Condition 2: 8 Hour
Replicate 13.808912325127
Replicate 24.5244825245908
Replicate 38.0886124518917
Condition 3: 24 Hour
Replicate 17.3035363344275
Replicate 24.2562780315149
Replicate 36.3999136511396


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_3987.p1 GENE.R_Transcript_3987~~R_Transcript_3987.p1 ORF type:3prime_partial len:855 (+),score=158.94,Xpo1|PF08389.8|4.7e-20,Xpo1|PF08389.8|1.5e+02 R_Transcript_3987:90-2651(+)
ATGGCAGGGATGGAGCTTCAGAACACAGTCAAAGAAGCCCTAAACGCTTTGTATCACCATCCAGACGACGCCGTTCGTATGCAAGCTGATCGTTGGCTTCAAGAATTTCAGCGCACTCTCGATGCTTGGCAGGTCGCAGATAATCTGCTTCATGATGCAAGTAGCAATCTAGAAACTCTAATATTTTGCTCTCAAACTTTGAGAAGCAAGGTGCAAAGAGATTTTGAAGAGCTTCCTTCAGAAGCATTTCGTCCGTTACGAGATTCATTAAATGGCTTGTTAAATAAATTTCACCATGGCCCTCCAAAAGTTAGAACCCAGATTAGCCTTGCAGTGGCAGCTTTGGCTGTTCACGTCTCTGTTGAAGACTGGGGAGATGGAGGTATTATACATTGGCTCAAGGAAGAGATGAACTCTCGTCCAGAATGCATACCAAGTTTTCTGGAGCTTCTAAAGGTTCTTCCTGAGGAGGCATTTAATTATAGAATCTCAGCCCGGCCTGAGAGACGTCGCCAATTCGAGAAGGAGCTTACTTCTGCTATGGATGTGGCACTCAGTTTATTGACTGCTTGTTTGAATGCCAATGAACTCAAGGAGCAGGTTCTTGAGGCATTTGCTTCTTGGCTTCGTTTGAGACGTGGGATTTCTCCGCCTGTGCTTGCTAATCATCCTTTGGTTCATACAGCTCTTTCTAGCCTAAGTTCTGAGATAATCTCTGAGGCTGCTGTTAACGTGACTTCCGAGTTGATACATTGTTCAGCAGTGGGGAACTCATCTGATGTTTCTGCCCAGATGTCGTTAATCCAAGTGGTTGTACCTCGAGTAATGAGTCTTAGGCCTCAGCTTAATGATCCCTCAAAGGATGAGGAAGATATGAAAGCTATTGGTCGTTTATTTGCGGACATGGGTGATTCATATGTTAAATTGATTGCAAGTGGTTCGGATGAGTCGATGATGATTGTGCAAGCATTGCTAGAGGTTGCTTCACATCCGGAATTTGATATCGCTTCAATGACTTTTAACTTCTGGCACAATCTTCAGGTTTTTTTGATTGAAAGGGATCTATATGTGTCACTTGGTAGTGAAGCATCCATTGAGGCAGAAAGAAACCGGAGGTTGCTAATCTTTCGTCTGGCATATGAATCTCTTGTGTCCTTGGTTAGCTCTCGAGTCCAGTACCCTGATGATTATATGGAGCTTTCAAAGGAGGACCTCAAGGATTTTAAACACACGAGATATGCGGTTGCGGATGTGCTAGTTGATGCAGCACTGGTTCTAGGCGGTGATGTCGTTTTAAAAATACTTTACTTGAAACTTGTTCAGGGTGTGGCCAGCTGTGGAAATGATCAAAATTGTGAATGGCGTCCAGCTGAGGCTGCTTTATACTGTATCAGGGCCATAGCAGATTATGTTTCAAATGTGGAAGCGGAAGTGATGCCTCAGGTCATGTCTTTGCTTCCGAAACTTCCCCAGCAACCTCAACTACTTCAGACAGTCTGCCTGACTATTGGTGCATATTCAAAATGGCTGGATGCATCATCAAATGGACTTTCTATTCTGCCTTCATTGGTGGACATTCTTATGAGTGGCATGAGCACTACTGAGGATACTGCTGCAGCAGCTGCATTGGCTTTTAGACACATTTGTGATGATTGTCGCAAGAAGCTCTGTGGATCTTTAGATGGCCTCTTCCATATATATCATAGGGCTGTCTATGCAGAAGGAGGAGCCTTCAGAGTATCTGCAGAAGATTCTCTGCATTTGGTTGAAGCACTGAGCATGGTGATTACTGAACTTCCTCCAGACCATGCAAAGAAGGCTCTGGAGGCATTATGCTTGCCTGTTGTCAATCCTCTGCAGGAAATTATCAATCAAGGTCCAGTTATTCTTGGACAAAAAGGTGCTCGTGAGCTTACTGTTCATATAGATCGACTGGCGTATATTTTCAGATATGTCAATCATCCTGAAGCTGTAGCAGATGCAATTCAGAGGCTCTGGCCGATTTTCAAAACAATCTTTGATGTCCGTGCATGGGACATGCGGACAATGGAGTCACTGTGCAAGGCTTGCAAATATGCTGTAAGAACTTCTGGTAGATTTATGGGCATCACAATTGGTGCTATGCTAGAGGAGATTCAAGGGCTCTATCAACATCATCTTCAGCCCTGCTTTCTGTATCTCTCGAGTGAAGTTATAAAGATATTTGGTTCTGATCCATCTTGTTCAGACTATCTCCGCAATTTAGTTGAAGCCCTCTTCAGACGAACGACTTGCCTTCTAGGAACAATTCAAGATTTTACAACGAGACCAGACATTGCAGATGATTGTTTTCTATTGGCATCAAGATGCATCCGGTATTGTCCTCAGATATTTATACCGTCAACGGTGTTCCCTTCGCTAATAGACTGTGCTATGGTTGGGGTTACCGTACAGCACAGGGAGGCATCAAATTCTATATTGTCCTATTTATCTGATGTCTTTGATCTCACAAATTCACGGGAGGGAATGCAGTACCAGTCCATCAGGGACAGTGTAATCATTCCAAGAGGAGCAACCATCACC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_3987.p1 GENE.R_Transcript_3987~~R_Transcript_3987.p1 ORF type:3prime_partial len:855 (+),score=158.94,Xpo1|PF08389.8|4.7e-20,Xpo1|PF08389.8|1.5e+02 R_Transcript_3987:90-2651(+)
MAGMELQNTVKEALNALYHHPDDAVRMQADRWLQEFQRTLDAWQVADNLLHDASSNLETLIFCSQTLRSKVQRDFEELPSEAFRPLRDSLNGLLNKFHHGPPKVRTQISLAVAALAVHVSVEDWGDGGIIHWLKEEMNSRPECIPSFLELLKVLPEEAFNYRISARPERRRQFEKELTSAMDVALSLLTACLNANELKEQVLEAFASWLRLRRGISPPVLANHPLVHTALSSLSSEIISEAAVNVTSELIHCSAVGNSSDVSAQMSLIQVVVPRVMSLRPQLNDPSKDEEDMKAIGRLFADMGDSYVKLIASGSDESMMIVQALLEVASHPEFDIASMTFNFWHNLQVFLIERDLYVSLGSEASIEAERNRRLLIFRLAYESLVSLVSSRVQYPDDYMELSKEDLKDFKHTRYAVADVLVDAALVLGGDVVLKILYLKLVQGVASCGNDQNCEWRPAEAALYCIRAIADYVSNVEAEVMPQVMSLLPKLPQQPQLLQTVCLTIGAYSKWLDASSNGLSILPSLVDILMSGMSTTEDTAAAAALAFRHICDDCRKKLCGSLDGLFHIYHRAVYAEGGAFRVSAEDSLHLVEALSMVITELPPDHAKKALEALCLPVVNPLQEIINQGPVILGQKGARELTVHIDRLAYIFRYVNHPEAVADAIQRLWPIFKTIFDVRAWDMRTMESLCKACKYAVRTSGRFMGITIGAMLEEIQGLYQHHLQPCFLYLSSEVIKIFGSDPSCSDYLRNLVEALFRRTTCLLGTIQDFTTRPDIADDCFLLASRCIRYCPQIFIPSTVFPSLIDCAMVGVTVQHREASNSILSYLSDVFDLTNSREGMQYQSIRDSVIIPRGATIT

Click here to download the sequence:
Link to NCBI Protein BLAST