Transcript Information: R_Transcript_398880.p1


Annotated TAIR IDAT1G76490.1
Annotated Gene Namehydroxy methylglutaryl CoA reductase 1
Annotated Gene Symbol(s)HMG1, HMGR1, AtHMGR1
Annotation TypeOrtholog
Chromosome Positionchr1:28695801-28698206 | Forward length=642
E-Value4.9E-49
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.27656001446544
Replicate 20
Replicate 30.17353589087994
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10.52176834608418
Replicate 20
Replicate 30.66326377839083


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_398880.p1 GENE.R_Transcript_398880~~R_Transcript_398880.p1 ORF type:internal len:132 (+),score=21.56,HMG-CoA_red|PF00368.14|1.5e-37 R_Transcript_398880:1-393(+)
GCTCAAAACGTGGAAAGTTCAAATTGTATTACCTTGATGGAAAGCACTAATGATGGCAAAGATTTATATATGACCGTCAGTATGCCTTCTATTGAAGTTGGAACCGTTGGTGGTGGTACTCACTTGGGAGCTCAATCGGCATGCTTGGACATTATGGGAGTGAGAGGATCAAACGCTGAACAACCAGGTAGAAATGCAGAACAATTAGCTCGAATTGTTTGTGGTGCTGTACTAGCAGGAGAATTATCTATCATGTCCGCCCTTGCTGCTGGTCACCTTGTCCAAAGTCATCTCAAACATAATCGATTAAAGCAAGAAGATATCACTAATGATATCAACATGGCACACACTCTCGCTGGCCAAGTCCCTAAATTAGGGGAAAATCCATCTGAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_398880.p1 GENE.R_Transcript_398880~~R_Transcript_398880.p1 ORF type:internal len:132 (+),score=21.56,HMG-CoA_red|PF00368.14|1.5e-37 R_Transcript_398880:1-393(+)
AQNVESSNCITLMESTNDGKDLYMTVSMPSIEVGTVGGGTHLGAQSACLDIMGVRGSNAEQPGRNAEQLARIVCGAVLAGELSIMSALAAGHLVQSHLKHNRLKQEDITNDINMAHTLAGQVPKLGENPSE

Click here to download the sequence:
Link to NCBI Protein BLAST