Transcript Information: R_Transcript_398953.p1


Annotated TAIR IDAT3G45140.1
Annotated Gene Namelipoxygenase 2
Annotated Gene Symbol(s)LOX2, ATLOX2
Annotation TypeHomolog
Chromosome Positionchr3:16525437-16529233 | Forward length=896
E-Value3E-110
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.59153114205107
Replicate 20.048602547259949
Replicate 30.15907456663995
Condition 2: 8 Hour
Replicate 10.39676170053407
Replicate 20.0517613005583
Replicate 30.084035234353643
Condition 3: 24 Hour
Replicate 10.053143072286352
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_398953.p1 GENE.R_Transcript_398953~~R_Transcript_398953.p1 ORF type:internal len:432 (+),score=93.80,Lipoxygenase|PF00305.15|1.3e-101,PLAT|PF01477.19|4e-06 R_Transcript_398953:3-1295(+)
AAAGCTTTGAATGCTAAAGCCATTGTCACTGTGAAGCCTCCTTTAATTAGTGATTTCAGCCTCAATCGAGGGCGTGATGATATTACTGATGTTTTTGGTTATACCCTCCTTTTGGAGTTTGTTAGTGCTGAGACTGATACAAAGACTGGATTGGAGAAGCCAACAATCAAAGGATACGCGCACTATATGCACACAAAAGATGGAAACGGGATGTTGAAATATGAGGCTAATATAGTAATTCCACCATCATTTGGGGAAATTGGTGCTGTGTATGTTGAGAATGAGCACCACAAAGAGATGCACCTTGCTGAAATCGTCCTTGATGGTTTATCTTATGGCGCTGTTCGCTTCACTTGTAACTCTTGGGTGCACTCCAAATTCGACAATCCTGCTAATAGGGTTTTCTTCACTAACAAGTCATACTTGCCTTCGGAAACACCAAGTGGATTGAGGCGACTACGTGAGAGAGAGATGGAAATTATTCGAGGGGATGGACAAGGAGAACGGAAATCCTTTGAAAGAATTTATGATTATGACACTTACAATGATCTTGGAAATCCTGATGACCCTGAAATGGCACGACCTGTTTTGGGTGGTAAAGATTTTCCTTATCCAAGACGTTGCAGGACTGGACGTCCTCGTACCGAGACAGATCCATACTCAGAGACAAGAAGTGGGAGTGTATATGTACCAAGAGATGAACAATTTTCAGAGCTCAAGGGAGGAACATTTGGGTTCAAGACAATCTACTCAGTGTCGCATGCTGTGATGCCATTACTAGAGTCAGTGGTGACTGACCCTAATCTTGGATTTCCATACTTCACTGCCATAGACTCACTCTTCAATGAAGGCCTTCATGTACCTGGACTCAAAGACCACAGCTCTCTTGGGGCTGTTTTGCCTAGGCTCCTTAGAGCTGTCACTGATCTTCAAGCTGATGTTCTTCGTTTCGAGACCCCTATGCTTTTTGAACGGGATAGGTTTTCTTGGTTTAGAGATGAGGAGTTTTCCCGTCAAGCTCTTGCTGGTGTCAATCCTTGTGTCATCAAGTTGGTCACACATGAGGACTGGCCATTGAAGAGTAAACTGGATCCCAAGATATATGGTCCACCAGAATCAGGAATCACAACAGAGCTAGTAGAGAAAGAGATGAAAGATTGTGTAAGTGTTGAAGAGGCAATAAACCAAAAGAGGCTGTTTATAATAGACTATCATGATACATTTTTGCCTTATGTAAACAAAGTTAGAGAGCTTAAGGGAACCACTCTTTATGGATCAAGAACCTTGTTCTTC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_398953.p1 GENE.R_Transcript_398953~~R_Transcript_398953.p1 ORF type:internal len:432 (+),score=93.80,Lipoxygenase|PF00305.15|1.3e-101,PLAT|PF01477.19|4e-06 R_Transcript_398953:3-1295(+)
KALNAKAIVTVKPPLISDFSLNRGRDDITDVFGYTLLLEFVSAETDTKTGLEKPTIKGYAHYMHTKDGNGMLKYEANIVIPPSFGEIGAVYVENEHHKEMHLAEIVLDGLSYGAVRFTCNSWVHSKFDNPANRVFFTNKSYLPSETPSGLRRLREREMEIIRGDGQGERKSFERIYDYDTYNDLGNPDDPEMARPVLGGKDFPYPRRCRTGRPRTETDPYSETRSGSVYVPRDEQFSELKGGTFGFKTIYSVSHAVMPLLESVVTDPNLGFPYFTAIDSLFNEGLHVPGLKDHSSLGAVLPRLLRAVTDLQADVLRFETPMLFERDRFSWFRDEEFSRQALAGVNPCVIKLVTHEDWPLKSKLDPKIYGPPESGITTELVEKEMKDCVSVEEAINQKRLFIIDYHDTFLPYVNKVRELKGTTLYGSRTLFF

Click here to download the sequence:
Link to NCBI Protein BLAST