Transcript Information: R_Transcript_398954.p1


Annotated TAIR IDAT3G45140.1
Annotated Gene Namelipoxygenase 2
Annotated Gene Symbol(s)LOX2, ATLOX2
Annotation TypeOrtholog
Chromosome Positionchr3:16525437-16529233 | Forward length=896
E-Value4.4E-234
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.53685179278585
Replicate 20
Replicate 30.056143964696452
Condition 2: 8 Hour
Replicate 10.48011499896559
Replicate 20.10961216588816
Replicate 30.17795696686654
Condition 3: 24 Hour
Replicate 10.05626913536202
Replicate 20.16217102125425
Replicate 30.16093900505072


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_398954.p1 GENE.R_Transcript_398954~~R_Transcript_398954.p1 ORF type:5prime_partial len:408 (+),score=63.52,Lipoxygenase|PF00305.15|1.9e-202 R_Transcript_398954:1-1224(+)
ACCTTGTTCTTCCTCACAGATGATAAAACTCTAAGACCTATTGCCATTGAGCTAACTCGACCTCCATCTGGAGATAAGCCTCAATGGAAGCAAGTATTTACACCTGGTTGGAACTCCACTTCTTGCTGGCTTTGGAGACTTGCTAAGGCCCATGTTCTAGCTCATGACACTGGCTACCACCAACTTATCAGCCACTGGCTTAGAACGCATTGCTGCACAGAGCCATACATAATAGCAGCAAACAGGCAACTGAGTGCAATGCATCCAATCTATAGGTTGTTGCATCCTCATTTCCGGTACACCATGGAGATCAATTCCCTTGCTCGAGTATTGTTGATCAATGCTGGTGGAATCATCGAGAGCGCCTTCTCGCCTGGCAAGTACTCCATTGAAATCAGTTCTGTCATCTATGGCCAAAATTGGCGCTTCGATCATCAAGCTTTACCAGCTGACCTTATTAGCAGGGGAATGGCCATCGAAGATGCATCGGAACCCTATGGAATAAAGCTAACAATAGAGGACTACCCATACGCGAATGATGGGCTAGTCCTTTGGGATATAATCAAGCAATGGGTGACGGATTATGTCACCCATTACTACCCGGAAGAAAAGCTGATTGAATCGGATCAAGAGCTCCAAGCATGGTGGCTAGAGGTACGAACAGTAGGGCACGGGGACAAGAAAGACGAACCATGGTGGCCGGAACTCAAGACCAGCCAAGATCTGGTCCAAATATTGACAACCATAATATGGATAACTTCAGGGCACCATGCTGCTGTCAATTTCGGACAGTATGGTTTCGGAGGGTACTTCCCTAACAGGCCTACAATCGCCAGGATTAAGATGCCTACGGAAGATCCCACGGATGATGAGTGGAAATTGTTCATGGAAAAGCCTGAAGTTGTGCTCCTTAGATGCTTCCCTTCTCAACTTCAGGCTACCAAAGTCATGGCTATACTAGATGTTCTTTCCAATCATTCTCCGGAGGAGGAATACTTGGGTGAAACTCCTGAGCCCTGTTGGGAAGATGAGCCTCTTATAAAGGCAGCTTTCGAGAAGTTTAATGGAAGATTAACTGAATTGGAAGGAATTATCGATGAGAGGAATGCGACTAAGGAGTTCAAGAACAGGCATGGGGCTGGTATTGTGCCTTATGAGCTTTTGAAGCCTTACTCTGAACCTGGGGTTACTTCTAAGGGAGTTCCTAACAGCATCTCTATATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_398954.p1 GENE.R_Transcript_398954~~R_Transcript_398954.p1 ORF type:5prime_partial len:408 (+),score=63.52,Lipoxygenase|PF00305.15|1.9e-202 R_Transcript_398954:1-1224(+)
TLFFLTDDKTLRPIAIELTRPPSGDKPQWKQVFTPGWNSTSCWLWRLAKAHVLAHDTGYHQLISHWLRTHCCTEPYIIAANRQLSAMHPIYRLLHPHFRYTMEINSLARVLLINAGGIIESAFSPGKYSIEISSVIYGQNWRFDHQALPADLISRGMAIEDASEPYGIKLTIEDYPYANDGLVLWDIIKQWVTDYVTHYYPEEKLIESDQELQAWWLEVRTVGHGDKKDEPWWPELKTSQDLVQILTTIIWITSGHHAAVNFGQYGFGGYFPNRPTIARIKMPTEDPTDDEWKLFMEKPEVVLLRCFPSQLQATKVMAILDVLSNHSPEEEYLGETPEPCWEDEPLIKAAFEKFNGRLTELEGIIDERNATKEFKNRHGAGIVPYELLKPYSEPGVTSKGVPNSISI*

Click here to download the sequence:
Link to NCBI Protein BLAST