Transcript Information: R_Transcript_398993.p1


Annotated TAIR IDAT5G49180.1
Annotated Gene NamePlant invertase/pectin methylesterase inhibitor superfamily
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:19940783-19942876 | Reverse length=571
E-Value5E-24
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.16011369258525
Replicate 20.36835614765435
Replicate 30.20093629470309
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10.20138427392723
Replicate 20.38693436650136
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_398993.p1 GENE.R_Transcript_398993~~R_Transcript_398993.p1 ORF type:5prime_partial len:114 (+),score=16.12,Pectinesterase|PF01095.15|1.6e-32 R_Transcript_398993:1-342(+)
CTTCCAGACCCAGAACTTTTCCCTGCAAGGTTCGAATTCAAGACTTTCTTAGGCCGACCATGGAAAGCTTATGCTAAGACCGTCTTTATGGAGACAACAATGGGAGACTTGATCCAACCTGAGGGTTACCAACCATGGGGTAACGGCCAAAACATCGACACTTGCTTCTATGGTGAGTATGCTAACCGTGGACCTGGTTCCAACACCGCACAGAGGATCAAGTGGAAGAACGTTAGAGTATTGGATAAGGCTGAGGCACAACGCTACGCAGCATCTGTCTTTCTCCGTGGTCATGAGTGGGTCACTGCTGCTGGTGTTCCCCTCAATCCTAATGTTGTTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_398993.p1 GENE.R_Transcript_398993~~R_Transcript_398993.p1 ORF type:5prime_partial len:114 (+),score=16.12,Pectinesterase|PF01095.15|1.6e-32 R_Transcript_398993:1-342(+)
LPDPELFPARFEFKTFLGRPWKAYAKTVFMETTMGDLIQPEGYQPWGNGQNIDTCFYGEYANRGPGSNTAQRIKWKNVRVLDKAEAQRYAASVFLRGHEWVTAAGVPLNPNVV*

Click here to download the sequence:
Link to NCBI Protein BLAST