Transcript Information: R_Transcript_39900.p2


Annotated TAIR IDAT2G30530.1
Annotated Gene Nameunknown protein; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G01970.1); Has 5513 Blast hits to 872 proteins in 154 species: Archae - 0; Bacteria - 30; Metazoa - 615; Fungi - 144; Plants - 149; Viruses - 12; Other Eukaryotes - 4563 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr2:13009071-13010867 | Forward length=371
E-Value8E-07
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.0421601591198
Replicate 21.5309802386884
Replicate 31.1930592497996
Condition 2: 8 Hour
Replicate 10.76518327960141
Replicate 23.0280360826606
Replicate 32.0798720502527
Condition 3: 24 Hour
Replicate 11.6740067770201
Replicate 20
Replicate 31.5959784667529


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_39900.p2 GENE.R_Transcript_39900~~R_Transcript_39900.p2 ORF type:complete len:96 (+),score=22.31 R_Transcript_39900:305-592(+)
ATGACAAAGCCGGAAGATTCCCAAGGTGGCTTCTGGGGCACAGTGGCTAGGAAAGCTAAAGCAATCCTTGAGGATGACGTTCCTCCTGAACACTTCAAAGCCTCTGGAACTGTTCATCAACAGGAAGATTATTTACCTATGAGAGGCAATGATGGTACTCAGTACCGAGCAGCCGAGAGCACTAAGAAACCAGACAGAGCTGTATTACGGAAGGGATTTGGTGCTGTTGCTTCTTCATTTAATTATATTGGCAATGCTTTGGAGGTAAGCTTGGTGTTTTTACGTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_39900.p2 GENE.R_Transcript_39900~~R_Transcript_39900.p2 ORF type:complete len:96 (+),score=22.31 R_Transcript_39900:305-592(+)
MTKPEDSQGGFWGTVARKAKAILEDDVPPEHFKASGTVHQQEDYLPMRGNDGTQYRAAESTKKPDRAVLRKGFGAVASSFNYIGNALEVSLVFLR*

Click here to download the sequence:
Link to NCBI Protein BLAST