Transcript Information: R_Transcript_39901.p1


Annotated TAIR IDAT2G30530.1
Annotated Gene Nameunknown protein; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G01970.1); Has 5513 Blast hits to 872 proteins in 154 species: Archae - 0; Bacteria - 30; Metazoa - 615; Fungi - 144; Plants - 149; Viruses - 12; Other Eukaryotes - 4563 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr2:13009071-13010867 | Forward length=371
E-Value1E-18
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.7142653105532
Replicate 22.6855733090614
Replicate 33.7290037947225
Condition 2: 8 Hour
Replicate 14.1284307178495
Replicate 24.9401948253782
Replicate 32.7438481170352
Condition 3: 24 Hour
Replicate 13.2034149620052
Replicate 23.8468474809146
Replicate 33.5631147164717


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_39901.p1 GENE.R_Transcript_39901~~R_Transcript_39901.p1 ORF type:complete len:172 (+),score=37.28 R_Transcript_39901:305-820(+)
ATGACAAAGCCGGAAGATTCCCAAGGTGGCTTCTGGGGCACAGTGGCTAGGAAAGCTAAAGCAATCCTTGAGGATGACGTTCCTCCTGAACACGTCAAAGCCTCTGAAACTGTTCATCAACGGGAAGATTATTTACCTATGAGAGGCAATGATGGTACTCAGTACCGAGCAGCCGAGAGCACTAAGAAACCAGACAGAGCTGTATTACGGAAGGGATTTGGTGCTGTTGCTTCTTCATTTAATTATATTGGCAATGCTTTGGAGGAAGGACTAAACAAAGTGGAGAACCGCACTGTGGATATTATCCAAGAAACTCGAAGTCGGAGGTCAAACGTCAGGAAAAAAGCTGCTCCTGACTTAAACAAACAGCCCATGAATATTGGGTATGCAAAAGAGCCATCTGCAGCTCAGAAGCAGATGATTCCAGCTGCACAATCTGATTTAGACATCCAATTGCAGGCATCTCGCGACGTAAGGTTGCTATGGCCATGGCTGCCAAAACAAAGTTGCTTCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_39901.p1 GENE.R_Transcript_39901~~R_Transcript_39901.p1 ORF type:complete len:172 (+),score=37.28 R_Transcript_39901:305-820(+)
MTKPEDSQGGFWGTVARKAKAILEDDVPPEHVKASETVHQREDYLPMRGNDGTQYRAAESTKKPDRAVLRKGFGAVASSFNYIGNALEEGLNKVENRTVDIIQETRSRRSNVRKKAAPDLNKQPMNIGYAKEPSAAQKQMIPAAQSDLDIQLQASRDVRLLWPWLPKQSCF*

Click here to download the sequence:
Link to NCBI Protein BLAST