Transcript Information: R_Transcript_39902.p1


Annotated TAIR IDAT2G30530.1
Annotated Gene Nameunknown protein; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G01970.1); Has 5513 Blast hits to 872 proteins in 154 species: Archae - 0; Bacteria - 30; Metazoa - 615; Fungi - 144; Plants - 149; Viruses - 12; Other Eukaryotes - 4563 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr2:13009071-13010867 | Forward length=371
E-Value4E-64
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 18.5860967648842
Replicate 25.9397428809264
Replicate 311.227315466535
Condition 2: 8 Hour
Replicate 19.5043817887333
Replicate 29.7093302731464
Replicate 38.1801666282665
Condition 3: 24 Hour
Replicate 19.5909260457843
Replicate 210.519778089256
Replicate 36.8399077146554


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_39902.p1 GENE.R_Transcript_39902~~R_Transcript_39902.p1 ORF type:complete len:304 (+),score=71.95 R_Transcript_39902:304-1215(+)
ATGACAAAGCCGGAAGATTCCCAAGGTGGCTTCTGGGGCACAGTGGCTAGGAAAGCTAAAGCAATCCTTGAGGATGATGTTCCTCCTGAACACGTTGAAGCCTCTGGAACAGTTCATCAACAGGAAGATTATATACCTATGAGAGGCAAGGATGGTACTCAATACCGAGCAGCCGAGAGCACTAAGAAACCAGACAGAGCTGTATTACGGAAGGGATTTGGTGCTGTTGCTTCTTCATTTAATTATATTGGCAATGCTTTGGAGGAAGGACTAAACAAAGTGGAGAACCGCACTGTGGATATTATCCAAGAAACTCGAAGTCGGAGGTCAAACGTCAGGAAAAAAGCTGCTCCTGACTTAAACAAACAGCCCATGAATATTGGGTATGCAAAGGAGCCATTTGCAGCTCAGAAGCAGATGATTCCAGCTGCACAATCTGATTTAGACATCCAATTGCAGGCATCTCGCGACGTTGCTATGGCCATGGCTGCCAAAACAAAGTTGCTTCTGAGAGAGCTGAAGACTGTGAAAGCTGACCTTGCTTTCGCCAAAGAGCGTTGTGCTCAGCTCGAGGAAGAGAACAGGATACTTCGAGAGAGTATGGAGAAAGGAGACAACCCTGAAGACGATGATCTGATACGGCTTCAACTGGAGAGCCTTTTGGCAGAAAAGGCTCGTTTGGCGCAAGAGAACGCTTTCTTTGCCCGGGAGAATCGCTTCTTACGGGAAGTGGTTGAATATCATCAGCTCACAATGCAGGATGTCATTTACCTAAACGAAAGGAGCGAAGAAATAACAGAAGTGTACCCTGCCAAAGTACCTAGTATGACCGATGGAAATACAGTAGCGACAGTCCCGTCTTTATCACCTTCCCTTCAATCACCTGAGCTTGTAAAGAAGTTTGATTTATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_39902.p1 GENE.R_Transcript_39902~~R_Transcript_39902.p1 ORF type:complete len:304 (+),score=71.95 R_Transcript_39902:304-1215(+)
MTKPEDSQGGFWGTVARKAKAILEDDVPPEHVEASGTVHQQEDYIPMRGKDGTQYRAAESTKKPDRAVLRKGFGAVASSFNYIGNALEEGLNKVENRTVDIIQETRSRRSNVRKKAAPDLNKQPMNIGYAKEPFAAQKQMIPAAQSDLDIQLQASRDVAMAMAAKTKLLLRELKTVKADLAFAKERCAQLEEENRILRESMEKGDNPEDDDLIRLQLESLLAEKARLAQENAFFARENRFLREVVEYHQLTMQDVIYLNERSEEITEVYPAKVPSMTDGNTVATVPSLSPSLQSPELVKKFDL*

Click here to download the sequence:
Link to NCBI Protein BLAST