Transcript Information: R_Transcript_39906.p1


Annotated TAIR IDAT5G01970.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G30050.1); Has 240 Blast hits to 236 proteins in 72 species: Archae - 0; Bacteria - 15; Metazoa - 51; Fungi - 19; Plants - 119; Viruses - 0; Other Eukaryotes - 36 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:373014-374651 | Reverse length=351
E-Value2E-53
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 18.4548347279433
Replicate 212.815923630727
Replicate 311.304623748751
Condition 2: 8 Hour
Replicate 113.885923411641
Replicate 210.26083755483
Replicate 310.136613723073
Condition 3: 24 Hour
Replicate 111.429211390415
Replicate 28.9748672541743
Replicate 310.138460612546


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_39906.p1 GENE.R_Transcript_39906~~R_Transcript_39906.p1 ORF type:complete len:231 (+),score=49.68 R_Transcript_39906:1512-2204(+)
ATGCCTGTATATAGGGTATCCATGTCTTATGATTCTGATGTCCAGGAAGGACTAAACAAAGTGGAGAACCGCACTGTGGATATTATCCAAGAAACTCGAAGTCGGAGGTCAAACGTCAGGAAAAAAGCTGCTCCTGACTTAAACAAACAGCCCATGAATATTGGGTATGCAAAAGAGCCATCTGCAGCTCAGAAGCAGATGATTCCAGCTGCACAATCTGATTTAGACATCCAATTGCAGGCATCTCGCGACGTTGCTATGGCCATGGCTGCCAAAACAAAGTTGCTTCTGAGAGAGCTGAAGACTGTGAAAGCTGACCTTGCTTTCGCCAAAGAGCGTTGTGCTCAGCTCGAGGAAGAGAACAGGATACTTCGAGAGAGTATGGAGAAAGGAGACAACCCTGAAGACGATGATCTGATACGGCTTCAACTGGAGAGCCTTTTGGCAGAAAAGGCTCGTTTGGCGCAAGAGAACGCTTTCTTTGCCCGGGAGAATCGCTTCTTACGGGAAGTGGTTGAATATCATCAGCTCACAATGCAGGATGTCATTTACCTAAACGAAAGGAGCGAAGAAATAACAGAAGTGTACCCTGCCAAAGTACCTAGTATGACCGATGGAAATACAGTAGCGACAGTCCCGTCTTTATCACCTTCCCTTCAATCACCTGAGCTTGTAAAGAAGTTTGATTTATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_39906.p1 GENE.R_Transcript_39906~~R_Transcript_39906.p1 ORF type:complete len:231 (+),score=49.68 R_Transcript_39906:1512-2204(+)
MPVYRVSMSYDSDVQEGLNKVENRTVDIIQETRSRRSNVRKKAAPDLNKQPMNIGYAKEPSAAQKQMIPAAQSDLDIQLQASRDVAMAMAAKTKLLLRELKTVKADLAFAKERCAQLEEENRILRESMEKGDNPEDDDLIRLQLESLLAEKARLAQENAFFARENRFLREVVEYHQLTMQDVIYLNERSEEITEVYPAKVPSMTDGNTVATVPSLSPSLQSPELVKKFDL*

Click here to download the sequence:
Link to NCBI Protein BLAST