Transcript Information: R_Transcript_39960.p1


Annotated TAIR IDAT5G05660.1
Annotated Gene Namesequence-specific DNA binding transcription factors;zinc ion binding;sequence-specific DNA binding transcription factors
Annotated Gene Symbol(s)ATNFXL2
Annotation TypeOrtholog
Chromosome Positionchr5:1691113-1695464 | Reverse length=880
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.5840353298488
Replicate 20.92507064584491
Replicate 30.67282807358525
Condition 2: 8 Hour
Replicate 11.340347747446
Replicate 21.2538812247394
Replicate 32.6173216915912
Condition 3: 24 Hour
Replicate 11.0727947302665
Replicate 21.1778509420869
Replicate 32.0455798772801


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_39960.p1 GENE.R_Transcript_39960~~R_Transcript_39960.p1 ORF type:complete len:749 (+),score=74.34,zf-NF-X1|PF01422.13|7.2e+03,zf-NF-X1|PF01422.13|2.6e+03,zf-NF-X1|PF01422.13|0.0021,zf-NF-X1|PF01422.13|6.5e+03,zf-NF-X1|PF01422.13|0.00052,zf-NF-X1|PF01422.13|0.02,zf-NF-X1|PF01422.13|0.0039,zf-NF-X1|PF01422.13|1.6e+04,zf-NF-X1|PF01422.13|0.0011,zf-NF-X1|PF01422.13|0.0024,zf-NF-X1|PF01422.13|4.3e+03,zf-NF-X1|PF01422.13|4.5,zf-NF-X1|PF01422.13|7.4e+02,zf-NF-X1|PF01422.13|4.5e+03,zf-NF-X1|PF01422.13|0.11,zf-NF-X1|PF01422.13|1.2e+04,zf-NF-X1|PF01422.13|0.046,zf-NF-X1|PF01422.13|6.4e+03,zf-NF-X1|PF01422.13|3.8e+02,zf-NF-X1|PF01422.13|77 R_Transcript_39960:83-2329(+)
ATGAGCACGACCTTGAATCATGACACCCAAAATTCCGACACCTCTGACTATGATTCAGACACCAACTCCTCCTCCACAACCCATCATCCTCTCCGCCATGTTGATCTCTCCAACACCATTTTCAAAGCCTATCTTGAGATCAACTCTCATGATTCCTTATCACCAGATTCATTAGACCTCTCTAAGATCCAATCTTTTCTCAATTCCTCATCCTCAGGTGCTCTTTCTTGCCTCATTTGCCTTGAACGTATCAGAACCACCGACCCCACTTGGTCCTGCACTGGCGAATGCTTTGCTGTCTTTCATCTTCAATGTATTCAGAACTGGGCTCAACAATCTTCCTCTCACGCGCTCTCGCGGGCCCTCACGCGCCTCCCTATCTCGGCTGAAAAGGCGGCCGAGATCACGGTATGGAACTGTCCTAAATGTAGATTTGAGTACCCTAAATGTTCTATTCCTAAGACTTATTATTGTTTTTGTGGTAAATTAGAAAACCCACCTCATGATCCTTGGGTTTTGCCCCATTCATGTGGGGAAATATGTGGGAGACCATTGAAAAACCGTTGTGGGCATTATTGTCTTTTGTTATGTCATCCTGGTCCTTGCCCTTCATGCCCTAAGCTAGTGAAATCTAGGTGCTTTTGTGGGGGTACTCAGGATGTTAGGCGTTGTGGGTTTAAGGAATTTTCATGTAATAAGACATGTAATAAGGTTTTGGAGTGTGGAATTCATAAGTGTGCTGAGACTTGTCATAATGAGGAATGCCCTCCTTGTAAGGAGAAGGGTGTGTATAGGTGCCAATGTGGTAAGGTGGAGGAAGAGAGGGAGTGTTGCATGAGGAATTTTCGATGTGAAAACTCGTGTGCCCGGCTGTTAGGGTGTGGGAAGCATGTTTGTAATAGAGGGTGCCATGAAGGTGAGTGTGGCCAATGCCCTCTTCAGGGAAAGAGGACTTGTCCCTGTGGGAAGAGGGTTTATGAAGGGATGTCCTGTGACGTTGAGGCGCCCTTGTGTGGGTCGACTTGTGATAAGAAGTTGGCTTGTGGAAGACATAGGTGTCCCGAGAGGTGCCATCGTGGACTTTGCGTTGAGACTTGTAGGATTGTGATCACTAAGTCATGTCGGTGTGGGAGCTCGAAGAAACAGACTCCTTGCTATCAAGATTTGGTATGCGAAAGGAAATGCTTGAGAGAAAGGGATTGTGGGCGCCATGCCTGTAGACGTCGCTGCTGTGATGGAGACTGCCCTCCATGTGCAGAGATATGTGGCAGGAAGCTCCGTTGTAGAAACCACAAATGCCCATCTCCATGCCACAGAGGTCCCTGTGCGCCTTGCCCGCTTATGGTGACTATTACATGTGCCTGTGGTGCAACACGTTTTGAGGTTCCTTGTGGTACAGAAGCAGAACAGAAGCCACCTCGTTGCCGAAAACCATGTCGCATAGATCCTTTATGTATGCATGGATCAAACAGTAAGCCGCACAAGTGCCATTACGGAGCCTGCCCACCTTGTAAGCTTCCTTGTGGAGAAGAGTATCCTTGTGGCCATGTCTGCAAGCTAAGCTGTCATGGTCCTCGTCCTCCTCCTAACCCAGAGTTCACGCTGAAACCAAAGAAGAAGAAACAGAATTATCAGAGTGAACCAACACCAGGAACACCATGCCCACCATGTCCAGAGCTTGTTTGGAGATCTTGTGTTGGTCAACACTTTGCAGCCGAAAGAATGATGGTTTGTTCAAATAAAGCAGAATTTTCCTGTGATAACTTGTGCGGAAATCCTCTTGCTTGTGGCAATCATTATTGCACTAAGACTTGTCATCCCCTTGAGAACTTGTCGTCCTCATCAGTTCAGCATAAACGAGGCGAACCCTGTGAAGAGTGTACGCTTCGTTGTGAGAAGGAGCGGACGCCTTCATGTTCCCATCCTTGCTCACTTCCATGTCATCCTGGAGAATGCCCTCCTTGCAAAGTTCTCTTAAAACGTGCTTGTCATTGTGGTGCAATGGTCCATGTCTTTGAGTGTATTTATTACAACACCCTATCTGCCAAGGAACAGCTGAAAGTCCGTTCATGCGGTGCACCTTGTCACAGAAAGTTACCTAATTGTACACATCTATGTCCCAAGACTTGCCATCCAGGCCTTTGTCCTTCACCAGAGAAGTGCTGTAAAAAGGTTACTGTTCGTTGTGCATGTCACAGTTTGAAGAAGGAATGGTTGTGCCAAGATGTGCAAAAAAACATATCATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_39960.p1 GENE.R_Transcript_39960~~R_Transcript_39960.p1 ORF type:complete len:749 (+),score=74.34,zf-NF-X1|PF01422.13|7.2e+03,zf-NF-X1|PF01422.13|2.6e+03,zf-NF-X1|PF01422.13|0.0021,zf-NF-X1|PF01422.13|6.5e+03,zf-NF-X1|PF01422.13|0.00052,zf-NF-X1|PF01422.13|0.02,zf-NF-X1|PF01422.13|0.0039,zf-NF-X1|PF01422.13|1.6e+04,zf-NF-X1|PF01422.13|0.0011,zf-NF-X1|PF01422.13|0.0024,zf-NF-X1|PF01422.13|4.3e+03,zf-NF-X1|PF01422.13|4.5,zf-NF-X1|PF01422.13|7.4e+02,zf-NF-X1|PF01422.13|4.5e+03,zf-NF-X1|PF01422.13|0.11,zf-NF-X1|PF01422.13|1.2e+04,zf-NF-X1|PF01422.13|0.046,zf-NF-X1|PF01422.13|6.4e+03,zf-NF-X1|PF01422.13|3.8e+02,zf-NF-X1|PF01422.13|77 R_Transcript_39960:83-2329(+)
MSTTLNHDTQNSDTSDYDSDTNSSSTTHHPLRHVDLSNTIFKAYLEINSHDSLSPDSLDLSKIQSFLNSSSSGALSCLICLERIRTTDPTWSCTGECFAVFHLQCIQNWAQQSSSHALSRALTRLPISAEKAAEITVWNCPKCRFEYPKCSIPKTYYCFCGKLENPPHDPWVLPHSCGEICGRPLKNRCGHYCLLLCHPGPCPSCPKLVKSRCFCGGTQDVRRCGFKEFSCNKTCNKVLECGIHKCAETCHNEECPPCKEKGVYRCQCGKVEEERECCMRNFRCENSCARLLGCGKHVCNRGCHEGECGQCPLQGKRTCPCGKRVYEGMSCDVEAPLCGSTCDKKLACGRHRCPERCHRGLCVETCRIVITKSCRCGSSKKQTPCYQDLVCERKCLRERDCGRHACRRRCCDGDCPPCAEICGRKLRCRNHKCPSPCHRGPCAPCPLMVTITCACGATRFEVPCGTEAEQKPPRCRKPCRIDPLCMHGSNSKPHKCHYGACPPCKLPCGEEYPCGHVCKLSCHGPRPPPNPEFTLKPKKKKQNYQSEPTPGTPCPPCPELVWRSCVGQHFAAERMMVCSNKAEFSCDNLCGNPLACGNHYCTKTCHPLENLSSSSVQHKRGEPCEECTLRCEKERTPSCSHPCSLPCHPGECPPCKVLLKRACHCGAMVHVFECIYYNTLSAKEQLKVRSCGAPCHRKLPNCTHLCPKTCHPGLCPSPEKCCKKVTVRCACHSLKKEWLCQDVQKNIS*

Click here to download the sequence:
Link to NCBI Protein BLAST