Transcript Information: R_Transcript_399630.p1


Annotated TAIR IDAT3G59510.1
Annotated Gene NameLeucine-rich repeat (LRR) family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:21988453-21989712 | Reverse length=419
E-Value9.3E-134
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.26200422423041
Replicate 20.1004607675421
Replicate 30.16440242293889
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10.054922983798335
Replicate 20.052763777250185
Replicate 30.15708878961888


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_399630.p1 GENE.R_Transcript_399630~~R_Transcript_399630.p1 ORF type:complete len:418 (-),score=40.29,LRR_8|PF13855.2|2.3e-05,LRR_8|PF13855.2|4.9e-08,LRR_8|PF13855.2|6.5e-05,LRR_8|PF13855.2|4.2e+02,LRR_8|PF13855.2|0.00024,LRR_8|PF13855.2|2.8e-06,LRR_8|PF13855.2|7.8e+02,LRR_4|PF12799.3|0.033,LRR_4|PF12799.3|0.0059,LRR_4|PF12799.3|0.00072,LRR_4|PF12799.3|0.0033,LRR_4|PF12799.3|26,LRR_4|PF12799.3|3.1,LRR_4|PF12799.3|0.00028,LRR_4|PF12799.3|0.44,LRR_4|PF12799.3|0.37,LRR_4|PF12799.3|7.4,LRR_1|PF00560.29|1.6e+04,LRR_1|PF00560.29|1.4,LRR_1|PF00560.29|30,LRR_1|PF00560.29|1,LRR_1|PF00560.29|2e+03,LRR_1|PF00560.29|1.1e+03,LRR_1|PF00560.29|37,LRR_1|PF00560.29|2.4,LRR_1|PF00560.29|1.5e+03,LRR_1|PF00560.29|30,LRR_1|PF00560.29|0.47,LRR_1|PF00560.29|54,LRRNT_2|PF08263.8|1.2e-05 R_Transcript_399630:54-1307(-)
ATGGCCAGCAAAGTGCACAAGCAAATGTCCTTTGGATTCATTGTTATAGCCACTCTTCTCATGTGTGCACCGAGGTTCAGTCACTCAACGACCTTGGGCTCAGAAGTCGATGTCCTCCGTGCCCTCAAGCAAGGGATAGACCCCAACTCGATCCCAGACTATTCGTTCCTCAGCAGCTGGGATTTCTCGGTGGACCCTTGCGAGAGTGCGGGGGCTCACTTCCTTGGGGTCCTGTGTATGATCCCTGATGACAATATCAGCAACAGCAGGATCACAACACTTGACCTTGACGGAGCCGGCTATGATGGGTTCCTGACCGATGACATTGGTAACCTAACCGAGCTGACGGTCCTGAACCTAAGCAGGAACAAGTTCCGAGGGCCAATCCCTGACAGCATCACAAAACTGAACAAGTTAACGACACTCGTGCTGTCTGACAATTTCTTTACTGGGAGCATACCTTTGGGGTTAAGAAGGCTCAAAAGACTCGAAGAACTCGATGTCTCCTCCAACAAGCTCACTGGCTCAATACCCACCTGGATTGCCAACTTTAGGAGCATGACATCCTTGAAGATGTCAAACAATGGGTTTTCTGGGAGAATCCCAAGTCTGGCTGGTTTATGGCAAATCAACACAATAGAACTCAGCAACAATGAACTATTCGGGTCCCTGCCTCAGCTTCCTACAAGCCTGAGAGTGTTGTCACTGAGCCACAATGTACTTTCAGGCACTATTCATCTTTTATGGAGGCTTCGAAGCCTCAGAACACTTGATCTGAGTGATAATAGGTTTACTGGTGCAATCCGAGGAGTAATTTCCTTGCCTGAGGTGACTACACTAAACCTTTCAGTCAATTGGTTCACAGAAATTGAGGTGGCCAAGTTTTCTGGTAGAGCCACACAACTTGAGATTCTTGATGTGCAAGAAAACCGCCTGCAAGGACATCTGCCAGTAAACCTAGTGACAATCCAGAATTTAACAGTGATCAACCTTAGTCACAACCAGTTTTCTGGACCTATTCCGAGGGATTTTGGGTTGAGACTTGGTGCACCTTGGAGGCGTTTGTACTTGGATCACAACTTTCTGGTAGGAGGCGTGCCAACAGAATTCGGCAACACAAAATTAAAGATCAAAGGTAGCCTGGCTTACAACTGCCTGAAGTGTCCGAGAAATGTAACGATGTGCAATGAAGGTCAACGCCCAGCTTCAGAGTGCATAGGGCAAGTAACTACAAAGGGTGAATTACCTCAGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_399630.p1 GENE.R_Transcript_399630~~R_Transcript_399630.p1 ORF type:complete len:418 (-),score=40.29,LRR_8|PF13855.2|2.3e-05,LRR_8|PF13855.2|4.9e-08,LRR_8|PF13855.2|6.5e-05,LRR_8|PF13855.2|4.2e+02,LRR_8|PF13855.2|0.00024,LRR_8|PF13855.2|2.8e-06,LRR_8|PF13855.2|7.8e+02,LRR_4|PF12799.3|0.033,LRR_4|PF12799.3|0.0059,LRR_4|PF12799.3|0.00072,LRR_4|PF12799.3|0.0033,LRR_4|PF12799.3|26,LRR_4|PF12799.3|3.1,LRR_4|PF12799.3|0.00028,LRR_4|PF12799.3|0.44,LRR_4|PF12799.3|0.37,LRR_4|PF12799.3|7.4,LRR_1|PF00560.29|1.6e+04,LRR_1|PF00560.29|1.4,LRR_1|PF00560.29|30,LRR_1|PF00560.29|1,LRR_1|PF00560.29|2e+03,LRR_1|PF00560.29|1.1e+03,LRR_1|PF00560.29|37,LRR_1|PF00560.29|2.4,LRR_1|PF00560.29|1.5e+03,LRR_1|PF00560.29|30,LRR_1|PF00560.29|0.47,LRR_1|PF00560.29|54,LRRNT_2|PF08263.8|1.2e-05 R_Transcript_399630:54-1307(-)
MASKVHKQMSFGFIVIATLLMCAPRFSHSTTLGSEVDVLRALKQGIDPNSIPDYSFLSSWDFSVDPCESAGAHFLGVLCMIPDDNISNSRITTLDLDGAGYDGFLTDDIGNLTELTVLNLSRNKFRGPIPDSITKLNKLTTLVLSDNFFTGSIPLGLRRLKRLEELDVSSNKLTGSIPTWIANFRSMTSLKMSNNGFSGRIPSLAGLWQINTIELSNNELFGSLPQLPTSLRVLSLSHNVLSGTIHLLWRLRSLRTLDLSDNRFTGAIRGVISLPEVTTLNLSVNWFTEIEVAKFSGRATQLEILDVQENRLQGHLPVNLVTIQNLTVINLSHNQFSGPIPRDFGLRLGAPWRRLYLDHNFLVGGVPTEFGNTKLKIKGSLAYNCLKCPRNVTMCNEGQRPASECIGQVTTKGELPQ*

Click here to download the sequence:
Link to NCBI Protein BLAST