Transcript Information: R_Transcript_399857.p2


Annotated TAIR IDAT3G24255.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:8789471-8793208 | Forward length=746
E-Value3E-22
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.9868481562267
Replicate 21.3361282083099
Replicate 32.2906737596152
Condition 2: 8 Hour
Replicate 11.1871934519876
Replicate 21.4229652080755
Replicate 31.705151300703
Condition 3: 24 Hour
Replicate 12.0870733843367
Replicate 21.3366823570047
Replicate 32.6530551135633


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_399857.p2 GENE.R_Transcript_399857~~R_Transcript_399857.p2 ORF type:complete len:330 (+),score=44.64,RVT_1|PF00078.23|1.9e-09 R_Transcript_399857:3752-4741(+)
ATGGAGGGGTTGGCAAGGAAACTGAGGCAACTCAAGAGAAATCCAACATACTCTTTACATCCCAAGTGTGTCAAGGTGGATCTCACACACCTGACATTTGCTGATGACCTGCTGATTTTCTGTAGGGGAGATGTGCCTGCTGTTAAGGCAGCAATTGAGTGTGTACATGACTTCTCAAGACAATCTGAGCTCTTTATAAATCCCCAGAAGACTAACATATATTTTGGAGGTGTAGATCCACATATCAGAAAGCTGATTCTTGAAGACACTAGATATAGAGAAGGTAGACTTCCAGTCAGATACCTGGGACTCCCTCTCAGTGCTGCTGGAGTAAATGCAAATATGTGCAATAGCCTGCTTGAGAAGATTAGAAGTAAACTGAACCATTGGGATACTAAAACCATTTCTTATGTAGGAAGAATTGAACTTGTCAACTCAGTTCTTTTTGGGGTTGAAAATTTTTGGTGCAGTGCATTCATGTTACCAAAGGTTACCATAGATAAGATTGAACAACTCTACAGACAATTTGTATGGGGAGCACATGATGGAAGTAGAAAAGTCATCTTTTTTGCCTGGAGAAGGGTATGTCAGAGCAAACAACATGGGGGCTTTAACATCAAAGAGAGTCTTAGATGGAACACAACAGTTATACTGAAATGGTTTGTTAAGCTGTATCAGGGACAAAATTCCCTATGGGTGGAGTGGATCAAAAAATACTACCTCAAAGATACTACTATCTGGGGGGTTAGGCCAAGACAGAGTGACTCATGGGTTTGGAAGAACCTTCTCAAGATTAGAGATGAATTTATCAGCGGGAGAGTACAGGAAGCACAGAAGCTAATACATAGCTGGGAAGCCAGGAAGAGACTCACTTCCATGGCTTATCAGTTCTTTAAGGGTGACAACCAGAGAGTGGCATGGGTAAAAACTGTTTGGGACCCTGTAAACACCCCCAAACATTCAGTGATTGTTGCCTTTAACTATTCATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_399857.p2 GENE.R_Transcript_399857~~R_Transcript_399857.p2 ORF type:complete len:330 (+),score=44.64,RVT_1|PF00078.23|1.9e-09 R_Transcript_399857:3752-4741(+)
MEGLARKLRQLKRNPTYSLHPKCVKVDLTHLTFADDLLIFCRGDVPAVKAAIECVHDFSRQSELFINPQKTNIYFGGVDPHIRKLILEDTRYREGRLPVRYLGLPLSAAGVNANMCNSLLEKIRSKLNHWDTKTISYVGRIELVNSVLFGVENFWCSAFMLPKVTIDKIEQLYRQFVWGAHDGSRKVIFFAWRRVCQSKQHGGFNIKESLRWNTTVILKWFVKLYQGQNSLWVEWIKKYYLKDTTIWGVRPRQSDSWVWKNLLKIRDEFISGRVQEAQKLIHSWEARKRLTSMAYQFFKGDNQRVAWVKTVWDPVNTPKHSVIVAFNYS*

Click here to download the sequence:
Link to NCBI Protein BLAST