Transcript Information: R_Transcript_399877.p1


Annotated TAIR IDAT3G47110.1
Annotated Gene NameLeucine-rich repeat protein kinase family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:17347103-17350296 | Reverse length=1025
E-Value2E-79
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.085095389066288
Replicate 20.19576970085126
Replicate 30.32037395239374
Condition 2: 8 Hour
Replicate 10.28538304134318
Replicate 20.20849307078029
Replicate 30.38080302000812
Condition 3: 24 Hour
Replicate 10.21405880864992
Replicate 20.25705429942398
Replicate 30.30612174387269


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_399877.p1 GENE.R_Transcript_399877~~R_Transcript_399877.p1 ORF type:5prime_partial len:429 (+),score=47.16,LRR_8|PF13855.2|0.011,LRR_8|PF13855.2|0.00036,LRR_8|PF13855.2|0.0004,LRR_8|PF13855.2|3.6e+02,LRR_8|PF13855.2|0.061,LRR_8|PF13855.2|0.00013,LRR_8|PF13855.2|0.00013,LRR_8|PF13855.2|0.0042,LRR_8|PF13855.2|0.0082,LRR_4|PF12799.3|0.077,LRR_4|PF12799.3|1.4e+02,LRR_4|PF12799.3|0.056,LRR_4|PF12799.3|2.3e+02,LRR_4|PF12799.3|22,LRR_4|PF12799.3|5.9,LRR_4|PF12799.3|38,LRR_4|PF12799.3|1.9,LRR_4|PF12799.3|0.033,LRR_1|PF00560.29|4.9,LRR_1|PF00560.29|1.6e+04,LRR_1|PF00560.29|6.3e+03,LRR_1|PF00560.29|4.3e+03,LRR_1|PF00560.29|96,LRR_1|PF00560.29|4.1e+02,LRR_1|PF00560.29|1e+02,LRR_1|PF00560.29|3.2e+03,LRR_1|PF00560.29|3.5e+02,LRR_1|PF00560.29|1.9e+02,LRR_1|PF00560.29|3.2e+02,LRR_1|PF00560.29|4.3,LRR_1|PF00560.29|1.4e+02,LRR_1|PF00560.29|0.26 R_Transcript_399877:3-1289(+)
CCTGCTTCTCTAGGCTTTTGTTCCGAACTCATCATCCTTGACCTTTCATCAAACAATCTTGCAGGAAGGATTCCATCAGAGCTCGGCCAGCTTTCAAAACTTGACGCCCTGAAAATCAGTGATAACTTCCTTACTGGCTCGATTCCACCTTCATTCAGAAACCTTAGTTCCATCACAAACATTATTTTGTTACGCAACAGCTTGACAGGATCAATACCAGAGGGCCTAGGTGACCTTCCCCTTCTAGTGAATATCGACCTAGGCTTAAATCAGTTAGATGGTGAAATCCCGCCTTCAATATTCAATAAGTCTTCTCTGATCAAGCTAGGTTTGACAGCAAATAGAATTTCAGGTACTCTTCCTTCGGATATGTTTTCCAAACTAACAAACTTAGCATTCCTTTATATTGGTGGGAATCGATTCTCTGGACGATTACCCCTGTCTTTGGGGAATGCTTCCAATCTCATTCAAGCTGACTTGTCAAGGAACAACTTCACTGGGCATATTCCCCTACTATGGAATCTCCCAAACATTCAGGTCCGAAGTTTCGATACTAACCAGCTTGTAACCGATGGGGATCATGGATGGGATTTTCTTACTTCTCTAGCCAATTCAACTCAGCTTCAAGTCTTCTCTTTGGCATCAAATCTTATCACAGGTAAGCTTCCATCCTCTGTTGGGAATCTTTGTCGACAATTATCACAGTTTGTCATAGGAGGAAATCACATAGAAGGAAGTTTACCAGCCGAAATTGGCAACTTGGTTGGCCTCTCCATGTTATCAGTTGAATTTAACTCGTTCAGTGGAAACATCCCAGCATCTATAGGAAACCTGCCAATCTTGCAGAACCTTTATTTGTATGAAAATAATTTTTCAGGGGAGATGCCAACATCACTTTCTAACTTGACTGCTTTGTCAGAAATGGCTCTGGGACGAAATTCTCTTAGCGGAACCATACCATCAAATATAGGAAACCTTCAGCATCTCCAAGCACTAGACCTCTCAGAAAATATGTTAGACGGAACAATACCTATAGAAATCTTTAGCATTCCAAACTTAGCTGAAGTTCTAAATCTTTCCTTTAACTCCTTAAGTGGTCATATTCCTGAACAAATAGGCAAACTAACGATGATTCAAGCAATATATTTATCAAGTAACCATTTCGCAGGAGGCATACCGTCTTCAATTGGAGGTTGTTCTAGTCTTGTGTACCTAAATTTGTCCCGAAATTCTCTTAGTGGTCTGATACCAAGTGCTATAGGTGATATGAAAGGGAATAAGGGATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_399877.p1 GENE.R_Transcript_399877~~R_Transcript_399877.p1 ORF type:5prime_partial len:429 (+),score=47.16,LRR_8|PF13855.2|0.011,LRR_8|PF13855.2|0.00036,LRR_8|PF13855.2|0.0004,LRR_8|PF13855.2|3.6e+02,LRR_8|PF13855.2|0.061,LRR_8|PF13855.2|0.00013,LRR_8|PF13855.2|0.00013,LRR_8|PF13855.2|0.0042,LRR_8|PF13855.2|0.0082,LRR_4|PF12799.3|0.077,LRR_4|PF12799.3|1.4e+02,LRR_4|PF12799.3|0.056,LRR_4|PF12799.3|2.3e+02,LRR_4|PF12799.3|22,LRR_4|PF12799.3|5.9,LRR_4|PF12799.3|38,LRR_4|PF12799.3|1.9,LRR_4|PF12799.3|0.033,LRR_1|PF00560.29|4.9,LRR_1|PF00560.29|1.6e+04,LRR_1|PF00560.29|6.3e+03,LRR_1|PF00560.29|4.3e+03,LRR_1|PF00560.29|96,LRR_1|PF00560.29|4.1e+02,LRR_1|PF00560.29|1e+02,LRR_1|PF00560.29|3.2e+03,LRR_1|PF00560.29|3.5e+02,LRR_1|PF00560.29|1.9e+02,LRR_1|PF00560.29|3.2e+02,LRR_1|PF00560.29|4.3,LRR_1|PF00560.29|1.4e+02,LRR_1|PF00560.29|0.26 R_Transcript_399877:3-1289(+)
PASLGFCSELIILDLSSNNLAGRIPSELGQLSKLDALKISDNFLTGSIPPSFRNLSSITNIILLRNSLTGSIPEGLGDLPLLVNIDLGLNQLDGEIPPSIFNKSSLIKLGLTANRISGTLPSDMFSKLTNLAFLYIGGNRFSGRLPLSLGNASNLIQADLSRNNFTGHIPLLWNLPNIQVRSFDTNQLVTDGDHGWDFLTSLANSTQLQVFSLASNLITGKLPSSVGNLCRQLSQFVIGGNHIEGSLPAEIGNLVGLSMLSVEFNSFSGNIPASIGNLPILQNLYLYENNFSGEMPTSLSNLTALSEMALGRNSLSGTIPSNIGNLQHLQALDLSENMLDGTIPIEIFSIPNLAEVLNLSFNSLSGHIPEQIGKLTMIQAIYLSSNHFAGGIPSSIGGCSSLVYLNLSRNSLSGLIPSAIGDMKGNKG*

Click here to download the sequence:
Link to NCBI Protein BLAST