Transcript Information: R_Transcript_399919.p1


Annotated TAIR IDAT5G53670.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: sperm cell; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:21796997-21797731 | Forward length=244
E-Value9E-30
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.10737035855717
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30.32032254035977
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_399919.p1 GENE.R_Transcript_399919~~R_Transcript_399919.p1 ORF type:internal len:170 (-),score=19.90,UBN2|PF14223.2|3.2e-15,UBN2_2|PF14227.2|3.6e-13,UBN2_3|PF14244.2|0.45,UBN2_3|PF14244.2|0.00099 R_Transcript_399919:3-509(-)
GCCAATCTGAACTCTGTTCCAATCCTTAACGGAACTAATTTTAAGGAGTGGAAGGAAAATGTTCAGATTACTCTGGGTTGTATGGATCTTGACTTAGCATTAAGAGTAGAGCAACCCGCTTCTCTTACGGAATCTAGTACTCCGGATGAGAGGAAATATTTTGAGAAGTGGGATCGCTCGAATCGCTTAAGTCTTGTGCTCATAAAGAAGGGCATTCCAGAAACTTTCAGGGGTGCTGTTTCTGATGAGTTTACCAATGCCAAAGATTTCCTAACTGAAATTGAGAAACGTTTTGTCAAAAGTGATAAGGCGGAAATAAGCATGTTATTAAACAGCTTTACTTCCAAAAGGTATTCAGGGCAAGGAAATATAAGGGAGTACATTATGGAAATGTCTCACATTGTTTCAAGGCTCAAGACTTTAAAGATTGTAATATCAGAGGATATACTTGTGCATATAGTCTTGAATTCTCTTCCAAAGATTTATGACTCTTTTAAAGTGAGTTAT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_399919.p1 GENE.R_Transcript_399919~~R_Transcript_399919.p1 ORF type:internal len:170 (-),score=19.90,UBN2|PF14223.2|3.2e-15,UBN2_2|PF14227.2|3.6e-13,UBN2_3|PF14244.2|0.45,UBN2_3|PF14244.2|0.00099 R_Transcript_399919:3-509(-)
ANLNSVPILNGTNFKEWKENVQITLGCMDLDLALRVEQPASLTESSTPDERKYFEKWDRSNRLSLVLIKKGIPETFRGAVSDEFTNAKDFLTEIEKRFVKSDKAEISMLLNSFTSKRYSGQGNIREYIMEMSHIVSRLKTLKIVISEDILVHIVLNSLPKIYDSFKVSY

Click here to download the sequence:
Link to NCBI Protein BLAST