Transcript Information: R_Transcript_39994.p1


Annotated TAIR IDAT4G04650.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:2353989-2355213 | Reverse length=332
E-Value3E-19
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 110.097382655802
Replicate 28.1900462616765
Replicate 37.9604974624927
Condition 2: 8 Hour
Replicate 19.0302480656507
Replicate 28.2465663527777
Replicate 38.4964985882662
Condition 3: 24 Hour
Replicate 18.6295303763711
Replicate 28.1338543426243
Replicate 37.4511335104331


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_39994.p1 GENE.R_Transcript_39994~~R_Transcript_39994.p1 ORF type:complete len:141 (+),score=16.02,zf-RVT|PF13966.2|1.7e-15,zf-RVT|PF13966.2|4e+02 R_Transcript_39994:485-907(+)
ATGATTATCTCTAATAGGGCTCGACCTAGAGCTGTGATGACTTTGTGGCTGGTTATGTGGATAAGACTCCTAACAGCTGATAGGTTGAAGTCTTGGGGTATGTCTGTTAATGATAAGTGTGTCTTTTGCAAGGACAACACTGAGACCTTAGACCATTTAATGTATGAATGTTCCTTTGCTCACTCACTCTGGCAACAGATTTTTGCTTGGCAGAGGGTGAACCCAGGGGGAAGAGTTCAGGATATTATTAACAACATGGCTAAGAAGCAAACGGGGAAGGCCTGCTCATTCATTGTGGCAGTGGCAGAGACTGTGCATGCATTGTGGTTAGAACGAAATAAAAGAGTGTTTGATATGGTGGAGCAGACTGTTGATCAACTGTATAGAGACATACAGTTCCATGTCTATTGTCGCATAGGGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_39994.p1 GENE.R_Transcript_39994~~R_Transcript_39994.p1 ORF type:complete len:141 (+),score=16.02,zf-RVT|PF13966.2|1.7e-15,zf-RVT|PF13966.2|4e+02 R_Transcript_39994:485-907(+)
MIISNRARPRAVMTLWLVMWIRLLTADRLKSWGMSVNDKCVFCKDNTETLDHLMYECSFAHSLWQQIFAWQRVNPGGRVQDIINNMAKKQTGKACSFIVAVAETVHALWLERNKRVFDMVEQTVDQLYRDIQFHVYCRIG*

Click here to download the sequence:
Link to NCBI Protein BLAST