Transcript Information: R_Transcript_400003.p1


Annotated TAIR IDAT4G16835.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:9472763-9474803 | Forward length=656
E-Value8.2E-284
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.13560892239761
Replicate 20.062396137938479
Replicate 30.10211027160246
Condition 2: 8 Hour
Replicate 10.14553262970131
Replicate 20.099677036439163
Replicate 30.13485594814552
Condition 3: 24 Hour
Replicate 10.13645056301756
Replicate 20.16385779264916
Replicate 30.26018073922018


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_400003.p1 GENE.R_Transcript_400003~~R_Transcript_400003.p1 ORF type:complete len:673 (-),score=115.30,PPR|PF01535.16|0.071,PPR|PF01535.16|7.8,PPR|PF01535.16|0.0084,PPR|PF01535.16|6.7e-07,PPR|PF01535.16|0.0021,PPR|PF01535.16|0.00017,PPR|PF01535.16|2.9e-08,PPR|PF01535.16|8e-06,PPR|PF01535.16|3.1e-08,PPR|PF01535.16|6.5,PPR|PF01535.16|0.029,PPR|PF01535.16|6.1,PPR_2|PF13041.2|0.033,PPR_2|PF13041.2|0.012,PPR_2|PF13041.2|0.0066,PPR_2|PF13041.2|1.6e-05,PPR_2|PF13041.2|0.0013,PPR_2|PF13041.2|4.8e-05,PPR_2|PF13041.2|3.7e-10,PPR_2|PF13041.2|3e-05,PPR_2|PF13041.2|4.7e-12,PPR_2|PF13041.2|18,PPR_2|PF13041.2|7.3e+02,PPR_2|PF13041.2|3e+03,PPR_1|PF12854.3|2.4,PPR_1|PF12854.3|1.8,PPR_1|PF12854.3|0.002,PPR_1|PF12854.3|0.00087,PPR_1|PF12854.3|0.27,PPR_1|PF12854.3|0.0035,PPR_1|PF12854.3|0.0004,PPR_1|PF12854.3|0.00014,PPR_1|PF12854.3|0.00062,PPR_1|PF12854.3|3.4,DYW_deaminase|PF14432.2|1.6e-44,PPR_3|PF13812.2|1.1,PPR_3|PF13812.2|5.7,PPR_3|PF13812.2|1.5,PPR_3|PF13812.2|0.024,PPR_3|PF13812.2|12,PPR_3|PF13812.2|0.52,PPR_3|PF13812.2|0.0067,PPR_3|PF13812.2|0.0076,PPR_3|PF13812.2|0.001,PPR_3|PF13812.2|1.1e+03,PPR_3|PF13812.2|52,PPR_3|PF13812.2|0.38 R_Transcript_400003:669-2687(-)
ATGAATCACCTTACCCACAATAACCCAGTAAAAAACCCTTCTTTACTTACTCTGCACATCCTTTCTTATGTTCCCAAACACCCAATATGTTTCTTTTCTCTCTCCCCAACTCACAACCCACATGATAACAGAAGAACAAATCAGGGTCCTTCCAGATATTTGGTTCCTCCCAATAACTTGAAAAGCCAAGCATCATATTCCAGTCCGTATTTTGATGGTAATTACAATGATGTCATTGCTTGTAATAGATTGATTACAAGCCACATTAGGGCAGGTGATTTAGAATCTTCTCTTAAAGTGTTTAGTAGAATGCCCATCAAGTCTACTATCACTTGGAATTCATTACTAGCTGGGTATTTGAAAAAACCCGGGAAACTAGCTCAAGCACGCCAACTGTTTGATAAAATTCCTGAACCAGATGTTTTCTCGTTTAATACCATGTTGTCCTGTTATTTGCGGAATTCAGATGTTGATAGTTCTAGGGAATTCTTTGAGCAAATTCCCATCAAGGATATTGCTTCTTGGAATAGTATGGTTTCGGGTTTTGCTGAGACTGGGATGATGGAGGAAGCTCAGAGACTGTTTTCGTCGATGCCCGAGAGGAATAGTGTGTCTTGGAATGTAATGATTTCGGGTTATGTGGATCGTGGGGGTTTGGATTCAGCGTTGACATTGTTTAGTTTGGACCCATTTACGAGTGTTGTTGCTTGGACTGCGTTGATAACTGGGTACATGAAGGTTGGGAAAGTTGAGTTGGCTGAGAGAATGTTCGAGGATGTGCCTATGAAGAGCTCTGTGACTTGGAATGCTATGATTTCTGGTTATGTTGAGAATTCTAGAGCAGAGGATGCCGTGAGGCTTTTCAAGACAATGGTGGAATCTGGGTTCAGGGCGACTCCGTTAACCATGACTAGTGCTTTGTTGGGTTGTAGTAATATGTCTGCATTGGTGTTAGGCAAACAAATCCACCAATTTTTGTACAAGTCCCAGTTATACTTGGATACAACTGTTGGGACTTCATTGTTGAGTATGTACTGCAAATGTGGAGTTTTAGAGGATGCATGGAAGTTGTTTAAGGAGATGCCAAGGAAAGACTTGGTGACTTGGAATGCTATGATTTCTGGTTATGCAACTCATGGTGATGGTGAAAAATCTCTTGCTCTATTTGATAAGATGAGAAACAATAAGATAAAGCCAGATTGGATCACCTTTGTTGGGGTTTTGTCGGCTTGCAACCACACTGGATTGGTAGAACTTGGGATGCAATATTTCGAGTCAATGCAGGGGGGTTATGGTGTTGAGGCTAAACCAGAGCACTATTCATGCATGGTTGACTTACTAGGCCGTGCTGATAAGCTAAAGGAAGCTACTGACCTGATACAAAAAATGCCACTTGAACCACATGCCGCTATATTTGGGAGCCTTCTAGGAGCCTCGAGGATCCACAAGAACATAGAGTTGGCTGAGTTTGCCGCAAACAACTTGCTTAGAATTGATCCTACAAACGCTGCAGCATATGTGCAGCTCGCTAATGTTTATGCAGCAAGGGGTAGGTGGGACAATGTCTCTAGGGTTTGGCGGTTGATGAAGGGTAATAGCATTGGTAAGATGCCAGGCTACAGTTGGATAGAGATAAAGAGTATAGTTCATGAGTTCAGATCAAGCGACAAAGAACACCCAGAATTGCCCTTGATACACGAAAAGCTGCAGGAGCTAGAGAACAGAATGAAGTCTGCAGGTTATATGCCTGATCTTGAATTTGTGTTGCATGATGTTACTAGGGAGCAAAAAGAAAAGCTTCTATTATGGCACAGTGAGAAACTGGCAATTGCTTACGGTCTGATTAAGGTGCCTGTAGGCTTGCCTATACGTGTGTTTAAGAATCTTAGAGTATGTGGGGATTGTCATCAAGCTATAAAGTACATATCAGCCATTGAAGGTAGGGAAATAATTGTAAGAGATAATACTAGGTTTCACCATTTCAAAAATGGGAGCTGCTGTTGTGGTGATTACTGGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_400003.p1 GENE.R_Transcript_400003~~R_Transcript_400003.p1 ORF type:complete len:673 (-),score=115.30,PPR|PF01535.16|0.071,PPR|PF01535.16|7.8,PPR|PF01535.16|0.0084,PPR|PF01535.16|6.7e-07,PPR|PF01535.16|0.0021,PPR|PF01535.16|0.00017,PPR|PF01535.16|2.9e-08,PPR|PF01535.16|8e-06,PPR|PF01535.16|3.1e-08,PPR|PF01535.16|6.5,PPR|PF01535.16|0.029,PPR|PF01535.16|6.1,PPR_2|PF13041.2|0.033,PPR_2|PF13041.2|0.012,PPR_2|PF13041.2|0.0066,PPR_2|PF13041.2|1.6e-05,PPR_2|PF13041.2|0.0013,PPR_2|PF13041.2|4.8e-05,PPR_2|PF13041.2|3.7e-10,PPR_2|PF13041.2|3e-05,PPR_2|PF13041.2|4.7e-12,PPR_2|PF13041.2|18,PPR_2|PF13041.2|7.3e+02,PPR_2|PF13041.2|3e+03,PPR_1|PF12854.3|2.4,PPR_1|PF12854.3|1.8,PPR_1|PF12854.3|0.002,PPR_1|PF12854.3|0.00087,PPR_1|PF12854.3|0.27,PPR_1|PF12854.3|0.0035,PPR_1|PF12854.3|0.0004,PPR_1|PF12854.3|0.00014,PPR_1|PF12854.3|0.00062,PPR_1|PF12854.3|3.4,DYW_deaminase|PF14432.2|1.6e-44,PPR_3|PF13812.2|1.1,PPR_3|PF13812.2|5.7,PPR_3|PF13812.2|1.5,PPR_3|PF13812.2|0.024,PPR_3|PF13812.2|12,PPR_3|PF13812.2|0.52,PPR_3|PF13812.2|0.0067,PPR_3|PF13812.2|0.0076,PPR_3|PF13812.2|0.001,PPR_3|PF13812.2|1.1e+03,PPR_3|PF13812.2|52,PPR_3|PF13812.2|0.38 R_Transcript_400003:669-2687(-)
MNHLTHNNPVKNPSLLTLHILSYVPKHPICFFSLSPTHNPHDNRRTNQGPSRYLVPPNNLKSQASYSSPYFDGNYNDVIACNRLITSHIRAGDLESSLKVFSRMPIKSTITWNSLLAGYLKKPGKLAQARQLFDKIPEPDVFSFNTMLSCYLRNSDVDSSREFFEQIPIKDIASWNSMVSGFAETGMMEEAQRLFSSMPERNSVSWNVMISGYVDRGGLDSALTLFSLDPFTSVVAWTALITGYMKVGKVELAERMFEDVPMKSSVTWNAMISGYVENSRAEDAVRLFKTMVESGFRATPLTMTSALLGCSNMSALVLGKQIHQFLYKSQLYLDTTVGTSLLSMYCKCGVLEDAWKLFKEMPRKDLVTWNAMISGYATHGDGEKSLALFDKMRNNKIKPDWITFVGVLSACNHTGLVELGMQYFESMQGGYGVEAKPEHYSCMVDLLGRADKLKEATDLIQKMPLEPHAAIFGSLLGASRIHKNIELAEFAANNLLRIDPTNAAAYVQLANVYAARGRWDNVSRVWRLMKGNSIGKMPGYSWIEIKSIVHEFRSSDKEHPELPLIHEKLQELENRMKSAGYMPDLEFVLHDVTREQKEKLLLWHSEKLAIAYGLIKVPVGLPIRVFKNLRVCGDCHQAIKYISAIEGREIIVRDNTRFHHFKNGSCCCGDYW*

Click here to download the sequence:
Link to NCBI Protein BLAST