Transcript Information: R_Transcript_400053.p1


Annotated TAIR IDAT4G23880.1
Annotated Gene Nameunknown protein; Has 73 Blast hits to 69 proteins in 22 species: Archae - 0; Bacteria - 4; Metazoa - 9; Fungi - 2; Plants - 18; Viruses - 0; Other Eukaryotes - 40 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:12415789-12416388 | Reverse length=199
E-Value6.9E-05
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.23105013866733
Replicate 20
Replicate 30.72489675937191
Condition 2: 8 Hour
Replicate 10.15497382878003
Replicate 20
Replicate 30.11488361152144
Condition 3: 24 Hour
Replicate 10
Replicate 20.13959024614289
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_400053.p1 GENE.R_Transcript_400053~~R_Transcript_400053.p1 ORF type:5prime_partial len:158 (+),score=13.77 R_Transcript_400053:3-476(+)
CATTGCAGGAGTTTACATTTTGTTTCATCCATATTTCACCGCAGAGCCTTTAGCTCAAAACTCATTCAACAAATATATCTCTTTCATCAAAAATTAACCATGCTACAATTGAATACAATACTTGAAACAATTGGTAGCAAGAAATGCAAAATTCTAAAGCATATATACAGAGACGAGCTTACCAAAAGTCCCATAATCTCTGAGATGAAGCTGCCACTGCTATCCTCTGAATGCCACAAAGATGACAACAAAATCATTGGAGCTTCTAAAACAAGCAGAAATAGTAATATCACCAACAACAATAGCAGCACAAGAGTGAAGGTTTTAATGACAAAGAAAGAGGCAGCGGAGCTATTGTCGAAGTGTAAAGAGGAGGGAATTTTGGAATTCATAGATGTGATTAGTGCGCTTGTCAAACTCCCAGCTCAACGGATTAATGTTGTTCCCGATACTAGTACTAGTACTCCTTGCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_400053.p1 GENE.R_Transcript_400053~~R_Transcript_400053.p1 ORF type:5prime_partial len:158 (+),score=13.77 R_Transcript_400053:3-476(+)
HCRSLHFVSSIFHRRAFSSKLIQQIYLFHQKLTMLQLNTILETIGSKKCKILKHIYRDELTKSPIISEMKLPLLSSECHKDDNKIIGASKTSRNSNITNNNSSTRVKVLMTKKEAAELLSKCKEEGILEFIDVISALVKLPAQRINVVPDTSTSTPC*

Click here to download the sequence:
Link to NCBI Protein BLAST