Transcript Information: R_Transcript_400549.p1


Annotated TAIR IDAT5G18880.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:6300535-6301422 | Reverse length=295
E-Value4E-12
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20.45326111840241
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_400549.p1 GENE.R_Transcript_400549~~R_Transcript_400549.p1 ORF type:complete len:148 (-),score=10.69,zf-RVT|PF13966.2|3.8e-16 R_Transcript_400549:21-464(-)
ATGGTGAGGAAGATTGTTAGCTGTGGAAAAATGTCATTGAAGAGAGACAAGGATACTACATCTGCAAAGATTGGATCTACATACAAGGAGCTCAAACAGGTTAATGAAAAAGTTAGCTGGCGCAGAATCAACATCTCAAATAGGGCAAGACCCAGGGCCATCTTCATCACTTGGCTTGCGCTATGGGGAAGACTCCCTACTACTGACAGATTATTCAGATGGGGATTCAGGGGTCTAAATTGTGACTGCTGTACGCAAGCTCTAGAAACTGGACCACACGTCTTTTATGAATGCTCTTATGCCCAAGCTATTTGGAAGGGACTATTTCACAGGTTAGAGAAAACCATATCAAGAGTTACCCTGAACCAAGTTGTCAACGCTTGTATAAGGATCATAGTTGCTGAAACGATATACTGCATATGGGAGGAACGAAATAGAAGATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_400549.p1 GENE.R_Transcript_400549~~R_Transcript_400549.p1 ORF type:complete len:148 (-),score=10.69,zf-RVT|PF13966.2|3.8e-16 R_Transcript_400549:21-464(-)
MVRKIVSCGKMSLKRDKDTTSAKIGSTYKELKQVNEKVSWRRINISNRARPRAIFITWLALWGRLPTTDRLFRWGFRGLNCDCCTQALETGPHVFYECSYAQAIWKGLFHRLEKTISRVTLNQVVNACIRIIVAETIYCIWEERNRR*

Click here to download the sequence:
Link to NCBI Protein BLAST