Transcript Information: R_Transcript_400921.p1


Annotated TAIR IDATMG01250.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)
Annotated Gene Symbol(s)ORF102
Annotation TypeHomolog
Chromosome PositionchrM:310514-310882 | Forward length=122
E-Value2E-13
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.544352133082
Replicate 21.2725030555332
Replicate 31.6659445524475
Condition 2: 8 Hour
Replicate 13.5615803559629
Replicate 22.168327936115
Replicate 32.3102049880493
Condition 3: 24 Hour
Replicate 13.6175938661837
Replicate 22.272360006908
Replicate 33.0510133805978


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_400921.p1 GENE.R_Transcript_400921~~R_Transcript_400921.p1 ORF type:internal len:165 (+),score=19.96,RVT_1|PF00078.23|2.8e-29 R_Transcript_400921:1-492(+)
GGGGCAGTGCTGGATGAAACCATTTCTAAGACACAGAGCGCTTTTGTGGGGGAACGCCAAATTCTAGACGCTTCCTTAGTGGCTAATGAGATAGTTGACGACGCTAGAAGGACAGGTAGTAAGGGGATTGTATTTAAGCTAGACTTTGAGAAGGCCTATGATAGGGTGTCCTGGGGGTTTTTGGATAGAGTGTTGGAGGCCAAGGGTTTTGGTGAGCGTTGGCGTAAGTGGATTTGGGGTTGCTTTAGTAACGCCAGTTTCTCGGTGCTAGTCAATGGGGCCCCCAAGGATTGGTTTTCTTCTTCCCGTGGCTTGAGGCAGGGGGACCCTCTATCCCCTTTCCTTTTTACCTTGGTGGTGGATGTCCTGAGTCGTATGATAGATAGGGGGGTGGAGGTAGGGGAAGTGGAGTGTTTTAGGGTCGGAAGGGAAAGTGTTTTGGTATCCCACCTCCAGTTTGCAGATGACACGATTCTTTTCCTCTCTGCGAGC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_400921.p1 GENE.R_Transcript_400921~~R_Transcript_400921.p1 ORF type:internal len:165 (+),score=19.96,RVT_1|PF00078.23|2.8e-29 R_Transcript_400921:1-492(+)
GAVLDETISKTQSAFVGERQILDASLVANEIVDDARRTGSKGIVFKLDFEKAYDRVSWGFLDRVLEAKGFGERWRKWIWGCFSNASFSVLVNGAPKDWFSSSRGLRQGDPLSPFLFTLVVDVLSRMIDRGVEVGEVECFRVGRESVLVSHLQFADDTILFLSAS

Click here to download the sequence:
Link to NCBI Protein BLAST