Transcript Information: R_Transcript_401070.p2


Annotated TAIR IDAT1G09690.1
Annotated Gene NameTranslation protein SH3-like family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:3136407-3137430 | Reverse length=164
E-Value7E-46
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.64422215134301
Replicate 20.24701529901527
Replicate 30.94321860690039
Condition 2: 8 Hour
Replicate 10.14403449968968
Replicate 20.1315345990658
Replicate 30
Condition 3: 24 Hour
Replicate 10.54018369947539
Replicate 20.1297368170034
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_401070.p2 GENE.R_Transcript_401070~~R_Transcript_401070.p2 ORF type:5prime_partial len:170 (+),score=-25.67,Ribosomal_L21e|PF01157.14|2.3e-40 R_Transcript_401070:3-512(+)
TGTCGTCCTCGTCCGCCTCAGCCACTCGTCATGCCTCACTCGTACGGTTACCGCGCGCACACGCGCCATTTGTTCGCTCGCGAGTTCGGCAAGCACGGTACGATCCCGTTGTCGACCTACCTGCACGTGTACAAGGTTGGTGACCTCGTGGATATCAAGGGTAACGGTGCCGTCCAGAAGGGTCTCCCGCACAAGTTCTACCACGGTAAGACTGGTGTCGTCTGGAATGTGACCCCGCGCGCCATCGGCATCCAGGTGAACAAGCTCCACCGCAACCGCATCATCCGCAAAAAGATTCACGTGCGCATTGAGCACGTGAAGAAGTCGACCTGCCGTGATGACTTCCTCAACCGCGTTCGCAAGAACGAGGAGATCAAGAAGGCCGCACGTGAGGGTGCCGCGCGCGTCGAGATCAAGCGCCTCCCGGTCCAGCCGATTGCGCCGCACTTCGTCAAGGGCAACAACGTCCAGGACCTCCAGCCGCTCGTCTACGCCGGTATCAACGTCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_401070.p2 GENE.R_Transcript_401070~~R_Transcript_401070.p2 ORF type:5prime_partial len:170 (+),score=-25.67,Ribosomal_L21e|PF01157.14|2.3e-40 R_Transcript_401070:3-512(+)
CRPRPPQPLVMPHSYGYRAHTRHLFAREFGKHGTIPLSTYLHVYKVGDLVDIKGNGAVQKGLPHKFYHGKTGVVWNVTPRAIGIQVNKLHRNRIIRKKIHVRIEHVKKSTCRDDFLNRVRKNEEIKKAAREGAARVEIKRLPVQPIAPHFVKGNNVQDLQPLVYAGINV*

Click here to download the sequence:
Link to NCBI Protein BLAST