Transcript Information: R_Transcript_40112.p1


Annotated TAIR IDAT4G13620.1
Annotated Gene NameIntegrase-type DNA-binding superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:7932138-7933304 | Forward length=388
E-Value2.8E-35
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 146.835571838796
Replicate 239.629673133013
Replicate 345.076924144197
Condition 2: 8 Hour
Replicate 122.517547829299
Replicate 222.864181432466
Replicate 327.139867969389
Condition 3: 24 Hour
Replicate 132.111402392448
Replicate 235.458615579706
Replicate 338.989673300775


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_40112.p1 GENE.R_Transcript_40112~~R_Transcript_40112.p1 ORF type:complete len:311 (+),score=66.02,AP2|PF00847.16|5.2e-14 R_Transcript_40112:275-1207(+)
ATGGGAACAGCTATAGATATTTACAATAGTACTAGTAGCAATACTCCTACTTTGTTAAATCCTTTGAGCGAGGAGCTAATTAGAGCCCTTGAACCTTACTTCATCACCACCAACAACATGATAACTTCTTCAGATTCAACTCTATCTTACAACCCTTACATGATGATGAGCACGAATCACCTGTCACCAATGGAGACCCAATTTTTCACTGAAGGTGCATCATCTCAAACCCAAATGTTTCCTTTCCAATTCCACCACCACCAGCAACTTCCGAATGCGGATTCCCAAAAGGTGAGCCAGTTGTTATCTCTGAAGCCGGTGCCTATGAAACAAGCTTCGGCTCAGAGAAAGGCGGCGAATGTAGGGGCTAAGCTGTACAGGGGGGTTCGACAAAGGCACTGGGGCAAGTGGGTGGCTGAGATCAGACTCCCTAAGAACCGAACCAGACTTTGGCTCGGCACCTTTGACACGGCTGAAGAGGCTGCCTTGGCTTATGACAAGGCTGCCTACAAGCTCAGGGGTGAATTTGCTCGGCTCAATTTTCCAAACCTCAAGCATCATGGTGCTCATGTAGCTGGTGAGTTTGGTCACTACAAGCCTCTTCATTCCTCTGTCAATGCTAAGCTTGACGCCATTTGTCAGAGCCTGGAGATTAATCAGAAACAGGGCAATACAGGAGAGACTACTTGTGCAGTTTCTGACTGTACTGCAGATGTTTCATCCAACTTGGTGGTTCCGAAATCCGAGGTCTGTCAAGGCCGGGAAGCTTTTACATCCCCTGCTTTCTCTGAAGAGTCATCATCGTTGTCGTCTCCGGAAGCTGACATCACTTTGTTGGATTTCAGTGAGCCTTCTTCTTCCTGGGATGAATCTGAGATCAATTTGACCTTGGATAAGTTCCCTTCTGTTGAGATCGACTGGTCTGCTCTTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_40112.p1 GENE.R_Transcript_40112~~R_Transcript_40112.p1 ORF type:complete len:311 (+),score=66.02,AP2|PF00847.16|5.2e-14 R_Transcript_40112:275-1207(+)
MGTAIDIYNSTSSNTPTLLNPLSEELIRALEPYFITTNNMITSSDSTLSYNPYMMMSTNHLSPMETQFFTEGASSQTQMFPFQFHHHQQLPNADSQKVSQLLSLKPVPMKQASAQRKAANVGAKLYRGVRQRHWGKWVAEIRLPKNRTRLWLGTFDTAEEAALAYDKAAYKLRGEFARLNFPNLKHHGAHVAGEFGHYKPLHSSVNAKLDAICQSLEINQKQGNTGETTCAVSDCTADVSSNLVVPKSEVCQGREAFTSPAFSEESSSLSSPEADITLLDFSEPSSSWDESEINLTLDKFPSVEIDWSAL*

Click here to download the sequence:
Link to NCBI Protein BLAST