Transcript Information: R_Transcript_40118.p1


Annotated TAIR IDAT4G13620.1
Annotated Gene NameIntegrase-type DNA-binding superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:7932138-7933304 | Forward length=388
E-Value2.8E-35
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 144.403837707152
Replicate 234.388171515155
Replicate 343.610904269598
Condition 2: 8 Hour
Replicate 119.227682410497
Replicate 225.084322578253
Replicate 322.340443840476
Condition 3: 24 Hour
Replicate 127.078439294215
Replicate 234.001857456307
Replicate 337.672107105333


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_40118.p1 GENE.R_Transcript_40118~~R_Transcript_40118.p1 ORF type:complete len:312 (+),score=55.93,AP2|PF00847.16|5.2e-14 R_Transcript_40118:280-1215(+)
ATGGCAGCAGCTATAGATATTTACAATAGCACTAGTAGCAAAAATCCTACTCTATTAGATCCTCTGAGCGAGGAGCTAGTGAGAGCCCTTGAACCTTACTTCACTACCACCAACAACACCACCATAACTTCTTCATATTTAACTCTTTCTTACAACCCTTACATGATGATGAGCACGAACCATCTGTCGCCAATGGAGACCCGATTTTTCACTCAAGGTGCATCATCTCAAACCCAAATGTTTCCTTTCCAGTTCCACCACCAGCAGCAACTTCCGAACGCGGATTCCCAAAAGGCGAGCCAGTTGTTATCTCTAAAGCCGGTGCCTATGAAACAAGCTTCGGCTCAGAGAAAGGCGGCGAATGTAGGGGCTAAGCTGTACAGGGGGGTTCGACAAAGGCACTGGGGCAAGTGGGTGGCTGAGATCAGACTCCCTAAGAACCGAACCAGACTTTGGCTCGGCACCTTTGACACGGCTGAAGAGGCTGCCTTGGCTTATGACAAGGCTGCCTACAAGCTCAGGGGTGAATTTGCTCGGCTCAATTTTCCAAACCTCAAGCACCATGGCGCTCATGTGGGTGGTGAGTTTGGACACTACAAGCCTCTTCATTCCTCTGTCAATGCTAAGCTTGACGCCATTTGTCAGAGCCTGGAGATTAATCAGAAACAGGGCAATACAGGAGAGACTACTTGTGCAGTTTCTGACTGTACTGCAGATGTTTCATCCAACTTGGTGGTTCCGAAATCCGAGGTCTGTCAAGGCCGGGAAGCTTTTACATCCCCTGCTTTCTCTGAAGAGTCATCATCGTTGTCGTCTCCGGAAGCTGACATCACTTTGTTGGATTTCAGTGAGCCTTCTTTTTCCTGGGATGAATCTGAGATCAATTTGACCTTGGATAAGTTCCCTTCTGTTGAGATCGACTGGTCTGCTCTTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_40118.p1 GENE.R_Transcript_40118~~R_Transcript_40118.p1 ORF type:complete len:312 (+),score=55.93,AP2|PF00847.16|5.2e-14 R_Transcript_40118:280-1215(+)
MAAAIDIYNSTSSKNPTLLDPLSEELVRALEPYFTTTNNTTITSSYLTLSYNPYMMMSTNHLSPMETRFFTQGASSQTQMFPFQFHHQQQLPNADSQKASQLLSLKPVPMKQASAQRKAANVGAKLYRGVRQRHWGKWVAEIRLPKNRTRLWLGTFDTAEEAALAYDKAAYKLRGEFARLNFPNLKHHGAHVGGEFGHYKPLHSSVNAKLDAICQSLEINQKQGNTGETTCAVSDCTADVSSNLVVPKSEVCQGREAFTSPAFSEESSSLSSPEADITLLDFSEPSFSWDESEINLTLDKFPSVEIDWSAL*

Click here to download the sequence:
Link to NCBI Protein BLAST