Transcript Information: R_Transcript_4013.p1


Annotated TAIR IDATMG01250.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)
Annotated Gene Symbol(s)ORF102
Annotation TypeHomolog
Chromosome PositionchrM:310514-310882 | Forward length=122
E-Value2E-10
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.2211487962664
Replicate 21.4786127053731
Replicate 30.80657526747016
Condition 2: 8 Hour
Replicate 10.51730700592772
Replicate 20.47241299664477
Replicate 31.406110681861
Condition 3: 24 Hour
Replicate 11.5359096384732
Replicate 21.3978685212338
Replicate 31.1560407405051


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_4013.p1 GENE.R_Transcript_4013~~R_Transcript_4013.p1 ORF type:complete len:284 (+),score=34.31,RVT_1|PF00078.23|3.4e-30 R_Transcript_4013:1-852(+)
ATGGGCAAGAAGAAGGGGAAAAAAGGTTGGTTTGTCCTCAAGTTGGATTTGGAGAAAGCCTATGACAGGATGGAATGGGATTTCATTAGGAATATGCTTTTCTCCTTTAATTTTGACTCCAAGTCCATTAAGCTCATCATGGAATGCATCTATACCGTCTCCACCTCAATCCTTGTCAATGGGGGACTCACGGAAGAATTTCAACCTTCTAGGGGAATTAGACAAGGAGACCCCCTCTCACCATACATATTTATTCTCTGTATGGAATTCCTGTCAACACTCATTCATAATGCTTGTGAGGACCGATCGTGGACCCCCTTCTCCTTTTCCAAATCGGGGTTTGTGATTTTCCACCTGCTATTTGCAGATGATGTCATCCTTTTTGGGGAAGCTAATCTCCACACACTTGAGGCTATGGAATCCACCCTCCACAAGTTTTGCCAAGCCTCGGGTCAAAAGATTAATGCGGCGAAGAGTAAGCTTTTCTTTTCTCACAACACAAGCCAAGACATCATTACTACCTTTGAGGAGACTTTGGGAACCAAAGCCTCCCTTGACCTTGGGACCTATCTTGGCCTTCCCTTGACCACCAAGAGGCCCTCTAAGAACCATCTGAGGGGGGTTGTGAGTAAGGTAGATGAGAGACTTGCCACCTGGAAAACCAACTTTATTACCAGGGCGGGGAGAGTTTGTCTTATCAATGCAACCCTCAATGCCATCCCCAATTATTTCATGCATGCTTTAGCTTTCCCTAAGAGCCTTTCTAAGGAGATGAATAGAACTATTAATAACTTTCTTTGGGGGACTCCTCGGATCATAGGAGGCTTTATCTGGTGGGGTGGGAGATGGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_4013.p1 GENE.R_Transcript_4013~~R_Transcript_4013.p1 ORF type:complete len:284 (+),score=34.31,RVT_1|PF00078.23|3.4e-30 R_Transcript_4013:1-852(+)
MGKKKGKKGWFVLKLDLEKAYDRMEWDFIRNMLFSFNFDSKSIKLIMECIYTVSTSILVNGGLTEEFQPSRGIRQGDPLSPYIFILCMEFLSTLIHNACEDRSWTPFSFSKSGFVIFHLLFADDVILFGEANLHTLEAMESTLHKFCQASGQKINAAKSKLFFSHNTSQDIITTFEETLGTKASLDLGTYLGLPLTTKRPSKNHLRGVVSKVDERLATWKTNFITRAGRVCLINATLNAIPNYFMHALAFPKSLSKEMNRTINNFLWGTPRIIGGFIWWGGRW*

Click here to download the sequence:
Link to NCBI Protein BLAST