Transcript Information: R_Transcript_401409.p1


Annotated TAIR IDAT4G04650.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:2353989-2355213 | Reverse length=332
E-Value1E-15
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.7515467582811
Replicate 20.74229344906104
Replicate 32.5451930662392
Condition 2: 8 Hour
Replicate 10.74199590749228
Replicate 21.3552049600719
Replicate 31.4667968178091
Condition 3: 24 Hour
Replicate 10.92758817081633
Replicate 21.4480725534217
Replicate 31.5476154829119


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_401409.p1 GENE.R_Transcript_401409~~R_Transcript_401409.p1 ORF type:complete len:198 (+),score=30.24,zf-RVT|PF13966.2|3e-22,zf-RVT|PF13966.2|6.2e+02 R_Transcript_401409:2804-3397(+)
ATGGCAGTGACAGCTGCAGGGCAGGGGTTAGCTAAATGCAGTAAAGAAGGCAAGTTCGACATCAAGGAAATGTATAATTGTTGGAGGCAAAAGGAGAAAAGGAAAAAATGGACTCAGATTGTTTGGTCAGCATGTGCTATGCCTAGAGCAAAGTTTATTGCATGGATGGCAATGCATGGGAAACTAAAAACTAGAGACAGACTAAAGAAGATTGGGGTAATAACAGATGATACATGCCCCCTGTGTAATAATCAGGCTGAAACAAGTGATCATTTATTCTTTGCTTGTCCAGTGAGTGCTGATATATGGAGCAAGCTTTTGAAATGGACTGGTTGCAATAGGCAGACTTACAAACTGAGGAAGAAGATCAAATGGTTCATGCATAGCGGACGCTTAAAGACAGTTATTCACCATATGAAGAGGTCATTATGGGTTGTTGCCATTGTTGAAGTGTGGCATGAAAGAAATCTGAGAATTTTCCAATCTGTTGCACGAGCACCTGATGTAATTATTAAGCAAATCCAGCTACAGTGTTGTTTAGTGATTTTGAAAAAATTTAGGCAAAAAGCTGAAGTAATACAGCTCCTAAAATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_401409.p1 GENE.R_Transcript_401409~~R_Transcript_401409.p1 ORF type:complete len:198 (+),score=30.24,zf-RVT|PF13966.2|3e-22,zf-RVT|PF13966.2|6.2e+02 R_Transcript_401409:2804-3397(+)
MAVTAAGQGLAKCSKEGKFDIKEMYNCWRQKEKRKKWTQIVWSACAMPRAKFIAWMAMHGKLKTRDRLKKIGVITDDTCPLCNNQAETSDHLFFACPVSADIWSKLLKWTGCNRQTYKLRKKIKWFMHSGRLKTVIHHMKRSLWVVAIVEVWHERNLRIFQSVARAPDVIIKQIQLQCCLVILKKFRQKAEVIQLLK*

Click here to download the sequence:
Link to NCBI Protein BLAST