Transcript Information: R_Transcript_401409.p4


Annotated TAIR IDATMG01250.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)
Annotated Gene Symbol(s)ORF102
Annotation TypeHomolog
Chromosome PositionchrM:310514-310882 | Forward length=122
E-Value1E-07
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.39680349901563
Replicate 20
Replicate 30.82995426073016
Condition 2: 8 Hour
Replicate 10
Replicate 20.16203537566077
Replicate 30.6576670514633
Condition 3: 24 Hour
Replicate 10
Replicate 20.15982071659839
Replicate 30.31721311140431


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_401409.p4 GENE.R_Transcript_401409~~R_Transcript_401409.p4 ORF type:complete len:138 (+),score=23.36,RVT_1|PF00078.23|1.6e-26 R_Transcript_401409:1745-2158(+)
ATGTCTCCTAGAGCTATGATCAGGATTGATATTAGAAAGGCCTATGACACAGTTTCATGGAATTTTTTGATGAAAGCTTTATTATACTTTGGGTTCCCTGAAGACATGGTGGATAGAATCAGGACTTGTGTTGATACTGCACAGTTTTCAGTCAATTTGAATGGGAGATTACATGGTTTCTTTAAAGGAGGGTGTGGTCTTAGACAAGGGGACCCTATGTCACCATACTTGCTTATGTTGTGTATGGAGATTTTATCTAGGATGTTGAGGAGGTGTTTCCTGGAGAAGGCTTTTAAGGCTCATCCAAAATGCGCTAAATTGAAGCTCAATCATGTAATATTTGCTGATGATATGTTGTTTTTTGCTAAAGGGGAAAGTAGTTCTGTAATGACTTTACAGAGAACCTTCAATTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_401409.p4 GENE.R_Transcript_401409~~R_Transcript_401409.p4 ORF type:complete len:138 (+),score=23.36,RVT_1|PF00078.23|1.6e-26 R_Transcript_401409:1745-2158(+)
MSPRAMIRIDIRKAYDTVSWNFLMKALLYFGFPEDMVDRIRTCVDTAQFSVNLNGRLHGFFKGGCGLRQGDPMSPYLLMLCMEILSRMLRRCFLEKAFKAHPKCAKLKLNHVIFADDMLFFAKGESSSVMTLQRTFN*

Click here to download the sequence:
Link to NCBI Protein BLAST