Transcript Information: R_Transcript_40160.p1


Annotated TAIR IDAT1G55535.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: cultured cell; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G13420.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:20732081-20733802 | Reverse length=260
E-Value5.8E-99
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 120.589339956923
Replicate 216.125158719717
Replicate 318.142136176153
Condition 2: 8 Hour
Replicate 117.140105463072
Replicate 218.783140746596
Replicate 319.894165239944
Condition 3: 24 Hour
Replicate 120.111039131469
Replicate 216.409112614589
Replicate 318.648324393236


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_40160.p1 GENE.R_Transcript_40160~~R_Transcript_40160.p1 ORF type:complete len:250 (+),score=38.95 R_Transcript_40160:456-1205(+)
ATGATGCTTTGTTCTTCTCTGAGGACCCGAATACAGTCCTGGCTTCGTGATTACGATAAGCTTCAATCTTTCGCAGTGATCCTTCTTTACATCCAAATTGGATGCGCGTTGCTTGGATCTTTGGGAGCATTGTACAACGGGGTACTGCTCATCAACTTGGCTATTGCTTTGTTTGCCCTTGTAGCTATTGAGAGTGGTAGCCAAAGCCTCGGCCGAACTTACGCCTTTTTACTCCTTTCTGCTATCTTGCTGGACATCATCTGGTTCGTTCTTTTCTCCCATGCTATATGGAATGTCTCCACAGAGGATTATGGAGCATTTTTCATCTTTTCCTTGAAAATCACACTTTTGATGGAAATTCTTGGGCTGTCTGTTAGGTTATTGTCCTCATTCTTGTGGATTCAGATGTATAGACTGGGGGTTTCACTCGTAGAAAGTGCTGTTTCTCGAGAGGCAGATTTTGATTTAAGAAACAGCTTTCTAAGTCCTGCAACTCCTGCAGTAGTTAGACAGTCCTCAGATTCAGAAGATCCACTGGGCGGATCTATTTATGATCCTGCGTATTACTCTTCCCTCTTTGAAGCCATTCAAGATGATAAGTGCTCATCTGAGGGTCAAAATCATGGTGTTAAAGATGGTGGTGGTTCATCTCAATCTGAAAGTTGTAAGCTAAAGCTATCAGTTGGGAATGCTTTTCAAGCTATGATGGATGAGCAAGGAGCAGCAAGTCAACCTATGATTCTCAACTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_40160.p1 GENE.R_Transcript_40160~~R_Transcript_40160.p1 ORF type:complete len:250 (+),score=38.95 R_Transcript_40160:456-1205(+)
MMLCSSLRTRIQSWLRDYDKLQSFAVILLYIQIGCALLGSLGALYNGVLLINLAIALFALVAIESGSQSLGRTYAFLLLSAILLDIIWFVLFSHAIWNVSTEDYGAFFIFSLKITLLMEILGLSVRLLSSFLWIQMYRLGVSLVESAVSREADFDLRNSFLSPATPAVVRQSSDSEDPLGGSIYDPAYYSSLFEAIQDDKCSSEGQNHGVKDGGGSSQSESCKLKLSVGNAFQAMMDEQGAASQPMILN*

Click here to download the sequence:
Link to NCBI Protein BLAST