Transcript Information: R_Transcript_401788.p1


Annotated TAIR IDAT4G34490.1
Annotated Gene Namecyclase associated protein 1
Annotated Gene Symbol(s)ATCAP1, CAP 1, CAP1
Annotation TypeHomolog
Chromosome Positionchr4:16484896-16487355 | Reverse length=476
E-Value2E-32
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.54978798056382
Replicate 20.25296747489516
Replicate 32.0698859273632
Condition 2: 8 Hour
Replicate 10.14750521052557
Replicate 20.13470410747702
Replicate 30.10934705193004
Condition 3: 24 Hour
Replicate 10.13830004354039
Replicate 20.39858901609477
Replicate 30.39556092807646


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_401788.p1 GENE.R_Transcript_401788~~R_Transcript_401788.p1 ORF type:5prime_partial len:166 (+),score=25.05,CAP_C|PF08603.7|9.5e-45 R_Transcript_401788:1-498(+)
CTTCACACAATGGCAGCAGTTCTCGAATTAGACAACAACAAGTGGAAAGTTGAAAACCAAAAAAATAACCAAGCTTTAGTTATCAACCCAACTTCTAACAAAGAATCGGTCAACCTCTTTAAAGTTGAAGATTCAGTCCTTCAAATTCAAGGAAAAGTTAGCTCCATTAACGTCAATAACTGCAACAAAGTTGGAATCGTTTTCTCTGATGTGATTGCTTCTGTTGAAGTTGTAAATAGTAAGAAAGTCCAACTCCAAGCAACTGGAAATGTTTCTAACATTCAACTTGACAACGTTCACGGAGCCACCATCTACCTCACCAACGAAAACAAAGCCAACATTGAAATCATTACTTCCAATGTCACTGAAGTTAATGTTGTCACACCCGGAGCCAATGCTGATGCTGACCCAAAGGAACAAGCCATTCCTCAACAATACATCAGCAAATTTGTTGGTGATAAATTAGTTACTAACCCAACCGAACACGTTGGTGTTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_401788.p1 GENE.R_Transcript_401788~~R_Transcript_401788.p1 ORF type:5prime_partial len:166 (+),score=25.05,CAP_C|PF08603.7|9.5e-45 R_Transcript_401788:1-498(+)
LHTMAAVLELDNNKWKVENQKNNQALVINPTSNKESVNLFKVEDSVLQIQGKVSSINVNNCNKVGIVFSDVIASVEVVNSKKVQLQATGNVSNIQLDNVHGATIYLTNENKANIEIITSNVTEVNVVTPGANADADPKEQAIPQQYISKFVGDKLVTNPTEHVGV*

Click here to download the sequence:
Link to NCBI Protein BLAST