Transcript Information: R_Transcript_4019.p1


Annotated TAIR IDAT5G17160.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G03130.1); Has 14330 Blast hits to 10381 proteins in 896 species: Archae - 94; Bacteria - 2881; Metazoa - 4019; Fungi - 1576; Plants - 515; Viruses - 110; Other Eukaryotes - 5135 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:5639843-5642427 | Reverse length=569
E-Value3E-17
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.6750928096749
Replicate 21.9728067505247
Replicate 31.5373649393391
Condition 2: 8 Hour
Replicate 11.6433466407547
Replicate 21.2005842599294
Replicate 31.705520460976
Condition 3: 24 Hour
Replicate 16.625407454975
Replicate 22.812415563228
Replicate 35.8758938756771


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_4019.p1 GENE.R_Transcript_4019~~R_Transcript_4019.p1 ORF type:internal len:149 (+),score=26.81 R_Transcript_4019:2-445(+)
CCATTTTCTGACCTTCTCATAACCAAAAGCCTCCTCCCTTTCACTCTTTCTCTCTCTTTCGTCTTCAATATCACGTTGAAGCAAATGGATTTCCACAGCCTGAAGAGACGTGATCTCCAAGCCTTGTGCAAGAAAAACAACATCCCTGCTAACATCACTAATGCCGCCATGGCCGATTTTCTTGCTTCTCTGAATATCGTTGAAGGTGTTGAAGAGTATTTGAGACGATCAGAGGTGTTAGGGTCAGAATCCCCAGAAAGATCTGTGATAACTTCCCCAAGTGCACCCCGAACATCAACCCGTCAGAAAGCCAGTAAGGAAGTGCTAGAATGCTCCAACTTGACCACAAGAACTCGCTGTGGAACCAGGAGAAGAGCTGTAGAAGGAACTGATGCCAAAAAGACTACAACCACGCGTACTACACGAAGAAGGGCACCCCAAGAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_4019.p1 GENE.R_Transcript_4019~~R_Transcript_4019.p1 ORF type:internal len:149 (+),score=26.81 R_Transcript_4019:2-445(+)
PFSDLLITKSLLPFTLSLSFVFNITLKQMDFHSLKRRDLQALCKKNNIPANITNAAMADFLASLNIVEGVEEYLRRSEVLGSESPERSVITSPSAPRTSTRQKASKEVLECSNLTTRTRCGTRRRAVEGTDAKKTTTTRTTRRRAPQE

Click here to download the sequence:
Link to NCBI Protein BLAST