Transcript Information: R_Transcript_402102.p1


Annotated TAIR IDAT5G04020.1
Annotated Gene Namecalmodulin binding
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:1081980-1086546 | Reverse length=1495
E-Value4E-22
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.19948591207343
Replicate 20.057366941028137
Replicate 30.062586714743586
Condition 2: 8 Hour
Replicate 10.26760508139066
Replicate 20.30547652788505
Replicate 30.099189129073153
Condition 3: 24 Hour
Replicate 10.25090499702409
Replicate 20.1807808105785
Replicate 30.11960494364425


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_402102.p1 GENE.R_Transcript_402102~~R_Transcript_402102.p1 ORF type:5prime_partial len:366 (-),score=98.29,CaM_binding|PF07839.7|4.7e+02,CaM_binding|PF07839.7|5.5e-24,CaM_binding|PF07839.7|6.2e+03 R_Transcript_402102:114-1211(-)
GAAATGACCACTATCCTCTCTGACAAACAAAAGTATACCAGTATGTGGCACCTGATCTATCAACATGCCGTATCAAGTGAAGCATCAATTGCTGCAAAACAGGGAGGCAATGAAGTTGACGAAGATGAATATGGTGAAGATGCAAGCAAAACCCATGAGATCAATGAGTTCAATTCGACTCAGAGTAATCACAACACAAATCAGAAGGAAAACGAAGACGGCCAGAATGCAGCTTGTGAAAGGAGCAATATTGATCAATCAGCTGCCATCAAGTTGGTGAAAGATGCAATTAGTAAAATCATACAACAGATATCTGATGAACAATCCTTTCAAGACCCACACATTAGCGCTGATATTGGTGGAGAACTTGGCAATAGAGGGGCTCCAATTTCTACTGAAGTAAATGCCAGAGGGAAGAGGGGGGATAACCACAGAAGTCCAGACACAGAAGATAAGCTGCACTTAGTGAAGAACACAAATGCCCCACTAGGAAAGCAAGCAAACCCAGATGAAGTGCAGATATCCCAAGGAAAAACTTCAGAGAGTTATAGCAAGCTGAAAAAATTTGTTGCAGCTGCCAACTTCATCAAGGCTATGGAGAGATTGAAGAGGAGAAGCCCACGCAAGCCACGCTTTCTGTCTCCTGAGGCAGTCTCAGAGGAAGAAAGAGTTCATCTGAGGCATCAAGACATCAACGAAAGGAGGAATAATGAAGAATGGATGCTTGATTATGCACTGAGAAAGGTTATTTCAAACCTGCATCCTGACCAGCAGAGAAAAGTGGCAAAACTTGTAGAAGCATTTGAAGCAATTACACCAGAGCAGAACGACGATTCCACCAGAAGTCAAACTAGAGCTGAACTACCCCCTGACGTTATAGAATCTAAGCATCACAATTCCACATCACATGAGGACAATGTTCAGACATGTCATGATGACATATTCAGCTCGCAGAGTCAGCAAGACAATTATCCCATAGATATTTCAAAATGCAGGACTGAGCAACATGATGAGGATCTTGATTCAGATGGAACCAATTTGCATGCTTACAATCAATTGAGGCCAAAAGGTAATGCTACTTCAGTATCAAATGAATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_402102.p1 GENE.R_Transcript_402102~~R_Transcript_402102.p1 ORF type:5prime_partial len:366 (-),score=98.29,CaM_binding|PF07839.7|4.7e+02,CaM_binding|PF07839.7|5.5e-24,CaM_binding|PF07839.7|6.2e+03 R_Transcript_402102:114-1211(-)
EMTTILSDKQKYTSMWHLIYQHAVSSEASIAAKQGGNEVDEDEYGEDASKTHEINEFNSTQSNHNTNQKENEDGQNAACERSNIDQSAAIKLVKDAISKIIQQISDEQSFQDPHISADIGGELGNRGAPISTEVNARGKRGDNHRSPDTEDKLHLVKNTNAPLGKQANPDEVQISQGKTSESYSKLKKFVAAANFIKAMERLKRRSPRKPRFLSPEAVSEEERVHLRHQDINERRNNEEWMLDYALRKVISNLHPDQQRKVAKLVEAFEAITPEQNDDSTRSQTRAELPPDVIESKHHNSTSHEDNVQTCHDDIFSSQSQQDNYPIDISKCRTEQHDEDLDSDGTNLHAYNQLRPKGNATSVSNE*

Click here to download the sequence:
Link to NCBI Protein BLAST