Transcript Information: R_Transcript_40213.p1


Annotated TAIR IDAT5G42240.1
Annotated Gene Nameserine carboxypeptidase-like 42
Annotated Gene Symbol(s)scpl42
Annotation TypeOrtholog
Chromosome Positionchr5:16888717-16890931 | Forward length=473
E-Value2.5E-61
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.8832420032646
Replicate 20.83318652445627
Replicate 31.6361955425823
Condition 2: 8 Hour
Replicate 14.0809774912075
Replicate 21.9521404781987
Replicate 33.6015100437276
Condition 3: 24 Hour
Replicate 14.5551204816873
Replicate 23.1507512700825
Replicate 33.9953746650686


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_40213.p1 GENE.R_Transcript_40213~~R_Transcript_40213.p1 ORF type:3prime_partial len:126 (+),score=36.05,Peptidase_S10|PF00450.18|2.3e-30 R_Transcript_40213:152-526(+)
ATGAGTGAAATGAGCAATCAGGGTGGCTCATGGTGGTGGTGGGTGTTTGTGGTGGTGGCTGTGGTGGTGGTTAATTATGGTGCGAAGGCTAAGGGATACCCAATGGAGGACCTTGTGGTAAACTTACCTGGGCAACCAAAGGTTGGGTTCAGGCAATTTGCTGGGTATATTGATGTGGATGTTAAGGCTGGCAGGAGTTTGTTTTACTATTTTGTTGAAGCTGATGGAAAACCTAACCATAAACCCCTCACCCTTTGGCTCAATGGAGGTCCTGGTTGTTCCTCCATGGGTGGTGGTGCTTTTACAGAATTGGGTCCATTCTTCCCTAGAGGCGATGGTAGAGGCCTTCGGAGAAATTCAATGTCATGGAACAAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_40213.p1 GENE.R_Transcript_40213~~R_Transcript_40213.p1 ORF type:3prime_partial len:126 (+),score=36.05,Peptidase_S10|PF00450.18|2.3e-30 R_Transcript_40213:152-526(+)
MSEMSNQGGSWWWWVFVVVAVVVVNYGAKAKGYPMEDLVVNLPGQPKVGFRQFAGYIDVDVKAGRSLFYYFVEADGKPNHKPLTLWLNGGPGCSSMGGGAFTELGPFFPRGDGRGLRRNSMSWNK

Click here to download the sequence:
Link to NCBI Protein BLAST