Transcript Information: R_Transcript_40216.p1


Annotated TAIR IDAT1G03090.2
Annotated Gene Namemethylcrotonyl-CoA carboxylase alpha chain, mitochondrial / 3-methylcrotonyl-CoA carboxylase 1 (MCCA)
Annotated Gene Symbol(s)MCCA
Annotation TypeOrtholog
Chromosome Positionchr1:739715-743819 | Forward length=734
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 116.756414424829
Replicate 29.6797460252557
Replicate 313.393052223557
Condition 2: 8 Hour
Replicate 114.349243436826
Replicate 226.989343942721
Replicate 332.790006281989
Condition 3: 24 Hour
Replicate 114.595487659548
Replicate 211.027629445289
Replicate 313.267950018536


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_40216.p1 GENE.R_Transcript_40216~~R_Transcript_40216.p1 ORF type:complete len:744 (+),score=178.92,CPSase_L_D2|PF02786.13|2.1e-76,CPSase_L_chain|PF00289.18|9.8e-44,CPSase_L_chain|PF00289.18|1.3e+04,Biotin_carb_C|PF02785.15|7.8e-34,Biotin_carb_C|PF02785.15|3.6e+03,ATP-grasp_4|PF13535.2|2.3e-16,Biotin_lipoyl|PF00364.18|1.1e-15,Dala_Dala_lig_C|PF07478.9|1.7e-10,Biotin_lipoyl_2|PF13533.2|0.002,Biotin_lipoyl_2|PF13533.2|0.0051,ATPgrasp_Ter|PF15632.2|3.9e-08,HlyD_D23|PF16576.1|2.8e-07,HlyD_3|PF13437.2|2.1,HlyD_3|PF13437.2|0.035 R_Transcript_40216:247-2478(+)
ATGGCGGCTCTTACTCTTCTACTCCGCCGTAAACACCACCGGAACTTGACGTCGCTTCTACTTTTCCGGCGATTCTCATCGTCGCCCCCGAATATTGGTGGAGGTGATAAGAAGAAGACGATAGAGAAGATACTGATAGCCAATAGAGGCGAGATTGCTTGTAGAATAATGACAACAGCTAAGCGATTAGGGATTCGAACTGTTGCGGTTTATAGTGACGCTGATCGTGATAGTCTTCACGTTAACTTCGCTGACGAGGCTGTTCATATTGGTCCTCCACCTGCGAAATTGAGTTATTTGAAAGGAATTTCGATCATCGAAGCTGCAAGAATGACCGGTGCTCAGGCTATCCACCCTGGTTATGGGTTTTTGTCAGAAAATGCTGAGTTTGCGCAGCTTTGTGAAGATGAAGGTCTATCATTCATCGGACCCCCAGCATCTGCAATACGAGATATGGGCGACAAAAGTGCATCAAAGAGGATAATGGGTGAAGCAGGTGTTCCTGTGGTGCCTGGATATCATGGTAATGATCAAGATATTGACCTAATGAAATCGGAAGCTGAAAAAATTGGTTATCCTATATTAATAAAGCCAACGCATGGAGGTGGAGGAAAGGGGATGAGAATTGTGGAAAACCCAAATGAATTTGTTGATTCGTTCTTGGCAGCAAGGAGGGAGGCTGCTGCTTCTTTTGGTGTAGACACAATCTTGCTTGAGAAATATATCACCAGACCAAGGCATATAGAAGTCCAGGTATTTGGAGATAAACATGGTCATGTATTATATTTGTATGAGAGGGATTGCAGTGTGCAAAGAAGACACCAGAAGATAATTGAAGAAGCCCCAGCACCCAATGTCAATGATGACTTCCGCTCTCAATTGGGTGAAGCTGCTGTGTCCGCAGCCAAGGCAGTTGGCTATTACAATGCTGGAACAGTTGAATTCATTGTGGATACTCTTTCAGGTCAATTTTACTTCATGGAGATGAACACGCGATTACAGGTTGAGCATCCTGTCACAGAGATGATTGTTGGACAAGATCTTGTAGAATGGCAGATTCGTGTTGCAAATGGCGAACCTCTTCCTATTTTGCAGTCTGAGGTGCCTTTGTCAGGTCATGCATTTGAGGCCCGCATATATGCTGAAAATGTTCCTAAAGGATTTCTCCCAGCAACTGGAGTTCTTCATCATTATCAACCTGTTCCAGTCTCAGAAACAGTTCGTGTTGAGACGGGAGTTAGAGAAGGAGATGCTGTTAGCATGCATTATGATCCCATGATTGCCAAGCTTGTTGTGTGGGGAGAAAATCGTGCTGCTGCATTAGTCAAATTGAAGGATTCCCTATCAAAATTTCAGGTTGCTGGTCTCCCAACTAACATCAATTTTCTTCAAAAACTTGCAAGCCATTGGGCTTTCGAGGATGGACAAGTTGAAACTCATTTTATTGAGCACCATAAAGATGAGCTTTTTGCTGATTCAAGTAACAAGCAGCTGGCAGAGGAACAGCAAAAATCTGCTACACATAGTGCCATGCTTGTTGCTGCATGTCTTTGTAAAATGGAGATCAACACAGCCAAGAAAATCTATCAGGGGGAAAGGAGCTCGCTTTCAATATGGTATGCTGATCCCCCTTTTAGAGTTAACTATCATGCCAAGCGTGATGTGGTGCTTGAGTGGGAAAATGACACTGCCACTGGTGGTCAAGTACCAGTGAAATTGGCAGTTACATATCAGCCAGATGGGAGCTATCTCATTGAGGTGCCAGAATGCAGTTCCCAAGGATTAGAAGTTAAAGTTCTGCAACAAGGTGATCGAGATTTCAGGGTTGAAGCTGGAGGATCAAGTGCGAACATAACTTTAGCTGTTTATACTAAGGATAAAAGCAAACACATACATATTTGGCATGGTTTGCAGCACTATCACTTCCGCCAAAAAGTTGGACTCGAGTTGTCTGGTGAAGGTGAGAGTGAAACTGGACACCGGCCAACAGTCGCTGAGACAGCATCTCACTCTCCAGGTACAGTATTGGCACCAATGGCTGGTTTAGTGGTCAAGGTTCTTGCCAAGAATGGGGACAAAGTGGAGGCAGGGAAACCAATTTTAGTAATGGAAGCCATGAAGATGGAGCATGTTGTGAAGGCACCTTCTTCTGGGCTCATCGACAGGCTTCAGGTGGCTCCTGGGCAGCAAGTTTCAGATGGTAGCACTCTCTTCACTATCAAGGATGAATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_40216.p1 GENE.R_Transcript_40216~~R_Transcript_40216.p1 ORF type:complete len:744 (+),score=178.92,CPSase_L_D2|PF02786.13|2.1e-76,CPSase_L_chain|PF00289.18|9.8e-44,CPSase_L_chain|PF00289.18|1.3e+04,Biotin_carb_C|PF02785.15|7.8e-34,Biotin_carb_C|PF02785.15|3.6e+03,ATP-grasp_4|PF13535.2|2.3e-16,Biotin_lipoyl|PF00364.18|1.1e-15,Dala_Dala_lig_C|PF07478.9|1.7e-10,Biotin_lipoyl_2|PF13533.2|0.002,Biotin_lipoyl_2|PF13533.2|0.0051,ATPgrasp_Ter|PF15632.2|3.9e-08,HlyD_D23|PF16576.1|2.8e-07,HlyD_3|PF13437.2|2.1,HlyD_3|PF13437.2|0.035 R_Transcript_40216:247-2478(+)
MAALTLLLRRKHHRNLTSLLLFRRFSSSPPNIGGGDKKKTIEKILIANRGEIACRIMTTAKRLGIRTVAVYSDADRDSLHVNFADEAVHIGPPPAKLSYLKGISIIEAARMTGAQAIHPGYGFLSENAEFAQLCEDEGLSFIGPPASAIRDMGDKSASKRIMGEAGVPVVPGYHGNDQDIDLMKSEAEKIGYPILIKPTHGGGGKGMRIVENPNEFVDSFLAARREAAASFGVDTILLEKYITRPRHIEVQVFGDKHGHVLYLYERDCSVQRRHQKIIEEAPAPNVNDDFRSQLGEAAVSAAKAVGYYNAGTVEFIVDTLSGQFYFMEMNTRLQVEHPVTEMIVGQDLVEWQIRVANGEPLPILQSEVPLSGHAFEARIYAENVPKGFLPATGVLHHYQPVPVSETVRVETGVREGDAVSMHYDPMIAKLVVWGENRAAALVKLKDSLSKFQVAGLPTNINFLQKLASHWAFEDGQVETHFIEHHKDELFADSSNKQLAEEQQKSATHSAMLVAACLCKMEINTAKKIYQGERSSLSIWYADPPFRVNYHAKRDVVLEWENDTATGGQVPVKLAVTYQPDGSYLIEVPECSSQGLEVKVLQQGDRDFRVEAGGSSANITLAVYTKDKSKHIHIWHGLQHYHFRQKVGLELSGEGESETGHRPTVAETASHSPGTVLAPMAGLVVKVLAKNGDKVEAGKPILVMEAMKMEHVVKAPSSGLIDRLQVAPGQQVSDGSTLFTIKDE*

Click here to download the sequence:
Link to NCBI Protein BLAST