Transcript Information: R_Transcript_40227.p1


Annotated TAIR IDAT5G60980.2
Annotated Gene NameNuclear transport factor 2 (NTF2) family protein with RNA binding (RRM-RBD-RNP motifs) domain
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:24543988-24546027 | Forward length=460
E-Value2E-46
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 139.890209502866
Replicate 217.486280589865
Replicate 330.426274557807
Condition 2: 8 Hour
Replicate 127.537294925473
Replicate 230.244961760874
Replicate 340.882502947437
Condition 3: 24 Hour
Replicate 152.405207379957
Replicate 238.010127024186
Replicate 348.698479728902


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_40227.p1 GENE.R_Transcript_40227~~R_Transcript_40227.p1 ORF type:internal len:329 (+),score=80.12,NTF2|PF02136.16|3.5e-27 R_Transcript_40227:1-984(+)
CTTCCCCCCTCATCAATTCCCTTTACTCCTCATTTACTTCGATTCCACCAGTCGCTACTAAGGTTTCTCCCAGCCGGCGTCGCTCTCTCTGTCTTCTTTCTCTCTCTATCCGAACATTCGGAAAGAGAGATGGCTACTCAAGTGGATGGAACATCCTCGGACGTCAGTGCTGAAATGGTGGGACATGCCTTTGTCACTAAGTTTTACAATATCTTGCACGAGTCGCCAGATCTGGCTCATAAGTTTTACCAGGATTCAAGCACAATGAGCCGGCCTGGACCCGATGGTATTTTGAAGACAGTGACTGCCATGAAGGGCATTGATGATCTTATTCTATCCCTAGATTGCAAAGATTACAAAGCAGAGATACTGACTGCCGATGCACAGGCTTCTCATATGGAGGGGGTGATTGTCTTAGTGACTGGCTGTTTAACTGGAAAGGACAATGTGAGGAGAAAGTTCACTGAAACATTCTTCCTGGCACCTCAAGACAAAGGCTATTTTGTACTCAATGATGCATTTAGATTTGTTGAGGAAGATAGCGTGCTAGTGGATGATACAGTGGAAGAGGAGTCTGATAAAACTGCTTCGCCAGCACCTCCAACACCAGTTCAGGAGACCATTAATGCCCCGGATAGCCATACTGTGGCAGCAGAAAAAACTGAGGAGAAAGTAGAAGCTGATGATGTGCCCAACAGTGAGCAGAAAACAACTGTTACTGAAGTAGTTGATCCACAGGCTCCTGCTGATTCTAGTAAAAATGTTAAACCAGTTGTTGATACTTCATCTAATGGTCATGTAGATGCTCCTAAGAAGTCTTATGCATCACTTCTCAAGAATGCAAAGGAGGGTGCATCTACAACTCTGGTACGTGCTCCTGCCAGCACAGTCAAAGTTGCAACACCTAATGCAGCACAACAGCCTGCAGCTTCTCCTCCTGGACAACAATCTCACTCAGATGCTGTGCCTGCAACCATCTCTGAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_40227.p1 GENE.R_Transcript_40227~~R_Transcript_40227.p1 ORF type:internal len:329 (+),score=80.12,NTF2|PF02136.16|3.5e-27 R_Transcript_40227:1-984(+)
LPPSSIPFTPHLLRFHQSLLRFLPAGVALSVFFLSLSEHSEREMATQVDGTSSDVSAEMVGHAFVTKFYNILHESPDLAHKFYQDSSTMSRPGPDGILKTVTAMKGIDDLILSLDCKDYKAEILTADAQASHMEGVIVLVTGCLTGKDNVRRKFTETFFLAPQDKGYFVLNDAFRFVEEDSVLVDDTVEEESDKTASPAPPTPVQETINAPDSHTVAAEKTEEKVEADDVPNSEQKTTVTEVVDPQAPADSSKNVKPVVDTSSNGHVDAPKKSYASLLKNAKEGASTTLVRAPASTVKVATPNAAQQPAASPPGQQSHSDAVPATISE

Click here to download the sequence:
Link to NCBI Protein BLAST