Transcript Information: R_Transcript_40228.p1


Annotated TAIR IDAT5G60980.2
Annotated Gene NameNuclear transport factor 2 (NTF2) family protein with RNA binding (RRM-RBD-RNP motifs) domain
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:24543988-24546027 | Forward length=460
E-Value7E-80
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 1111.73504515014
Replicate 293.822947630312
Replicate 399.676606546381
Condition 2: 8 Hour
Replicate 198.049689137993
Replicate 2111.07683170567
Replicate 3116.62705131797
Condition 3: 24 Hour
Replicate 1138.84244371115
Replicate 2130.65707598735
Replicate 3130.51908933684


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_40228.p1 GENE.R_Transcript_40228~~R_Transcript_40228.p1 ORF type:complete len:461 (+),score=117.35,NTF2|PF02136.16|6.8e-27,RRM_1|PF00076.18|1.8e-09,RRM_6|PF14259.2|1.2e-06 R_Transcript_40228:143-1525(+)
ATGGCTACTCAAGTGGATGGAACATCCTCGGACGTCAGTGCTGAAATGGTGGGACATGCCTTTGTCACTAAGTTTTACAATATCTTGCACGAGTCGCCAGATCTGGCTCATAAGTTTTACCAGGATTCAAGCACAATGAGCCGGCCTGGACCCGATGGTATTTTGAAGACAGTGACTGCCATGAAGGGCATTGATGATCTTATTCTATCCCTAGATTGCAAAGATTACAAAGCAGAGATACTGACTGCCGATGCACAGGCTTCTCATATGGAGGGGGTGATTGTCTTAGTGACTGGCTGTTTAACTGGAAAGGACAATGTGAGGAGAAAGTTCACTGAAACATTCTTCCTGGCACCTCAAGACAAAGGCTATTTTGTACTCAATGATGCATTTAGATTTGTTGAGGAAGATAGCGTGCTAGTGGATGATACAGTGGAAGAGGAGTCTGATAAAACTGCTACGCCAGCACCTCCGACACCAGTTCAGGAGATCATTAATGCCCCCGATAGTCATACTATGGCAGCAGAAAAAACTGAGGAGAAAGTAGAAGCTGATGATGTGCCCAACAGTGAGCAGAAAACAACTGTTACTGAAGTAGCTGTTCCACAAGCTCCTGCTGATTCTATTGAAAATGTTAAACCAGTTGTTGATACTTCATCTAATGGTCATGTAGATGCTCCTAAGAAGTCTTATGCATCACTTCTCAAGAATGCAAAGGAGGGTGCATCTACAACTCTGGTACGTGCTCCTGCCAGCACAGTCAAAGTTGCAACACCTAATGCAGCACAACAGCCTGCAGCTTCTCCTCCTGGACAACAATCTCACTCAGATGCTGTGCCTGCAACCATCTCTGAATCTTCTGCCCCCAATGGTAGCAGTATGAATGAAACTAGCGGTGATCAGGCAGAAGACAAGGGCCATTCCATATACATTGGGGATCTGCCTTACGATGCAACAACTGAGCTGGTTGAAAAGGAATTCAAAAGGTTTGGGCGCATCAGACGCAATGGCATTCAAGTGCGATCAAATAAGGGGTATTGTTTCGGTTTTGTTGAGTATGAAGATGCCAGCGGGAAACAAAATGCTATTGAAATGGGCACACTTCGAATTGCCGGAAAAGAAGCTTTTATTCAAGAGAAGAAAACAAGTACCCGAGTTGTCAACGGTGTCAGCATGTACCCATCTGGACGAGGCAGCTTCCGCAACGACGGCTTCAGGGGTCGTGGCAGCTATGCAAACGGGCGTGGCTATGGAAGAAACGACTACAACAATAAGCGCAATGGGGACATTCCCCCACGAAGTAACCATAATGGAGATGGATACCAGGGTGTTTACCAGAATGGTGGTGGAAGGCCTGCTCGTCAAGGGGGTGGCAACAAGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_40228.p1 GENE.R_Transcript_40228~~R_Transcript_40228.p1 ORF type:complete len:461 (+),score=117.35,NTF2|PF02136.16|6.8e-27,RRM_1|PF00076.18|1.8e-09,RRM_6|PF14259.2|1.2e-06 R_Transcript_40228:143-1525(+)
MATQVDGTSSDVSAEMVGHAFVTKFYNILHESPDLAHKFYQDSSTMSRPGPDGILKTVTAMKGIDDLILSLDCKDYKAEILTADAQASHMEGVIVLVTGCLTGKDNVRRKFTETFFLAPQDKGYFVLNDAFRFVEEDSVLVDDTVEEESDKTATPAPPTPVQEIINAPDSHTMAAEKTEEKVEADDVPNSEQKTTVTEVAVPQAPADSIENVKPVVDTSSNGHVDAPKKSYASLLKNAKEGASTTLVRAPASTVKVATPNAAQQPAASPPGQQSHSDAVPATISESSAPNGSSMNETSGDQAEDKGHSIYIGDLPYDATTELVEKEFKRFGRIRRNGIQVRSNKGYCFGFVEYEDASGKQNAIEMGTLRIAGKEAFIQEKKTSTRVVNGVSMYPSGRGSFRNDGFRGRGSYANGRGYGRNDYNNKRNGDIPPRSNHNGDGYQGVYQNGGGRPARQGGGNK*

Click here to download the sequence:
Link to NCBI Protein BLAST