Transcript Information: R_Transcript_402333.p1


Annotated TAIR IDATMG01250.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)
Annotated Gene Symbol(s)ORF102
Annotation TypeOrtholog
Chromosome PositionchrM:310514-310882 | Forward length=122
E-Value3E-23
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.30087298277009
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10.13453771949036
Replicate 20.24572397627677
Replicate 30.19946824857568
Condition 3: 24 Hour
Replicate 10.50456719181767
Replicate 20.36354822347105
Replicate 30.60131056832135


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_402333.p1 GENE.R_Transcript_402333~~R_Transcript_402333.p1 ORF type:internal len:182 (+),score=15.40,RVT_1|PF00078.23|7.2e-26 R_Transcript_402333:3-545(+)
CGAATCCTACCCGACATTATTTCCCCAGCCCAAAGTGCTTTTACTCCTGGTAGGCTTATTAGTGATAATATTATTGTGGCCTTCGAAGTTTTTCATTCAATGCATTGCAATACGAGTAGTCATGGGAGTATGGCGTTGAAACTTGATATGAAAAAAGCCTATGATAGGGTGGAATGGGAGTTTCTAGAGAAAATAATGTTGAAGTTGGGTTTCACAAGACCTTGGGTAGAGGTGGTCATGAATTGTGTGCGAACAGTGTCTTATTCGTTCCTCATCAATGGAGAACCTTGTGGTTTGCTTAAGCCCTCGCGGGGTCTCCGACAAGGAGACCCTATCTCCCCTTACTTATTTCTGTTTTGTGCAGAGGGTCTGTCAAGCCTTCTCACCCATGCTATGGAACATCAAAACTTTCAAGGGCATAGAGTGGCACCAAATGCACCAATTATCTCACATCTTCTTTTTGCAGATGATACTATTATTTTTGCTAAAGCGGATGCGACACATGCAGGAATGATAATGGATATCCTCGGGGATTACGAGCGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_402333.p1 GENE.R_Transcript_402333~~R_Transcript_402333.p1 ORF type:internal len:182 (+),score=15.40,RVT_1|PF00078.23|7.2e-26 R_Transcript_402333:3-545(+)
RILPDIISPAQSAFTPGRLISDNIIVAFEVFHSMHCNTSSHGSMALKLDMKKAYDRVEWEFLEKIMLKLGFTRPWVEVVMNCVRTVSYSFLINGEPCGLLKPSRGLRQGDPISPYLFLFCAEGLSSLLTHAMEHQNFQGHRVAPNAPIISHLLFADDTIIFAKADATHAGMIMDILGDYER

Click here to download the sequence:
Link to NCBI Protein BLAST