Transcript Information: R_Transcript_4025.p1


Annotated TAIR IDAT5G17160.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G03130.1); Has 14330 Blast hits to 10381 proteins in 896 species: Archae - 94; Bacteria - 2881; Metazoa - 4019; Fungi - 1576; Plants - 515; Viruses - 110; Other Eukaryotes - 5135 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:5639843-5642427 | Reverse length=569
E-Value5.2E-20
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.0237824512695
Replicate 20.80582816096666
Replicate 32.7839745052893
Condition 2: 8 Hour
Replicate 11.6706773524773
Replicate 21.0965890881605
Replicate 32.5543844369841
Condition 3: 24 Hour
Replicate 15.776164718271
Replicate 23.1977774084419
Replicate 35.5069278316714


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_4025.p1 GENE.R_Transcript_4025~~R_Transcript_4025.p1 ORF type:complete len:469 (+),score=143.98 R_Transcript_4025:82-1488(+)
ATGGATTTCCACAGCCTGAAGAGACGTGATCTCCAAGCCTTGTGCAAGAAAAACAACATCCCTGCTAACATCACTAATGCCGCCATGGCCGATTTTCTTGCTTCTCTGAATATCGTTGAAGGTGTTGAAGAGTATTTGAGACGATCAGAGGTGTTAGGGTCAGAATCCCCAGAAAGATCTGTGATAACTTCCCCAAGTGCACCCCGAACATCAACCCGTCAGAAAGCCAGTAAGGAAGTGCTAGAATGCTCCAACTTGACCACAAGAACTCGCTGTGGAACCAGGAGAAGAGCTGTAGAAGGAACTGATGCCAAAAAGACTACAACCACGCGTACTACACGAAGAAGGGCACCCCAAGAGGCCTCCACTCAGCAAAAGATGGAGGAATATTTGCAGGCCAAGTTTGAGGCTGATTTGGAGCAATCTGATTTTTCAGAGAACAATGGCCTGCATAATGAATCCACTGGAGTATCTGAGGTTTCAGGAGTCAGTGTGGATCAAAGAGGTATCCAAAATGAGCCTGAAGATGAGGTACCAGACGTTAATGAGGAAGTGCATGTGGGAAATGACCCCAAAGACAGCAGGGAGGAAGACCATGTTGCTATTGACGCACCTCAAGGGTCCACTGAGACCTTCAGTAGTACTCAGAAGGTGGACTTCCACAGCCTCAGTAGGAAGGAACTCCAAAACCTCTGTAAGAAGAACAAGATCCCTGCAAATATCAGCAATGCTGCAATGGTTGATGCCCTTGAGTCTCTTGAGAGAGTTGAAGGACTTGAAGAGCTTCTGAACGAGTCTGACTGTCTTACTGCAAAATCACCTGAAATGTCAAGGATGACTTCAACTCGGGTTCGCCAAACACGTACTTGTCAGAAAAGCACTCGGCGAAAGCCTGCATATGCTGGTTCTGCACTTGGTAAGGTTGAAACTGTACAGAAAAAGGAAGACAGTGTAGTGCAAAGTTTGGCAAAGAAGATTGAGTCAAATATGGAGGACACAGAATGTCCTGCTTCTGTTACTACTGGTAAAGATGGTCAAGGGGAGAATGATCTGCAGAGTCATTTTGAGCTGTGCCTGGAGAAGTCTGAAGTTTCGGATCTTGTCTCTGAGAATAGTAGCAGCAATAATGCTGAAACAAAATCTACGTCACTACCAGAAGAGGTTTCAGATGAATCTGAGACTTCAAGGGTTGTAATGGAGACTGAAGAGGAAGATCGGGATGATGTGATAGGAAACAAGTTTGGTGGGGGAAAGAGTAATGACACTGAGACTGAAGTGTGTGATTTTAGTAAGGAACCAGTAGCAACTGCAGACAATTTTGTCGGCCAATATACTGATGATGAAGTGAAGCCAAAAGAAGATCAGATCCAGCTGATATTTTGGGACAAAAGGAAAGCAACTTATTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_4025.p1 GENE.R_Transcript_4025~~R_Transcript_4025.p1 ORF type:complete len:469 (+),score=143.98 R_Transcript_4025:82-1488(+)
MDFHSLKRRDLQALCKKNNIPANITNAAMADFLASLNIVEGVEEYLRRSEVLGSESPERSVITSPSAPRTSTRQKASKEVLECSNLTTRTRCGTRRRAVEGTDAKKTTTTRTTRRRAPQEASTQQKMEEYLQAKFEADLEQSDFSENNGLHNESTGVSEVSGVSVDQRGIQNEPEDEVPDVNEEVHVGNDPKDSREEDHVAIDAPQGSTETFSSTQKVDFHSLSRKELQNLCKKNKIPANISNAAMVDALESLERVEGLEELLNESDCLTAKSPEMSRMTSTRVRQTRTCQKSTRRKPAYAGSALGKVETVQKKEDSVVQSLAKKIESNMEDTECPASVTTGKDGQGENDLQSHFELCLEKSEVSDLVSENSSSNNAETKSTSLPEEVSDESETSRVVMETEEEDRDDVIGNKFGGGKSNDTETEVCDFSKEPVATADNFVGQYTDDEVKPKEDQIQLIFWDKRKATY*

Click here to download the sequence:
Link to NCBI Protein BLAST