Transcript Information: R_Transcript_40287.p1


Annotated TAIR IDAT3G19080.1
Annotated Gene NameSWIB complex BAF60b domain-containing protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:6596082-6598667 | Forward length=462
E-Value3E-59
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 18.3502051264116
Replicate 26.1299543744135
Replicate 36.6877141947388
Condition 2: 8 Hour
Replicate 19.7943459788981
Replicate 214.238998321858
Replicate 38.4707516228472
Condition 3: 24 Hour
Replicate 19.9219948478353
Replicate 27.8587704092862
Replicate 38.2519162497728


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_40287.p1 GENE.R_Transcript_40287~~R_Transcript_40287.p1 ORF type:5prime_partial len:435 (+),score=70.69,SWIB|PF02201.14|6e-31,SWIB|PF02201.14|1.4e-25,DEK_C|PF08766.7|1.7e-17 R_Transcript_40287:1-1305(+)
ATCACCACCTTCCCTTCTCTCCTCTTTAGGGATTTTTTTTTGTCTTCCCCCTTCCAAATCCAAACGACAAACAACAAAGCCCATCCTCAAAAACCCGTTTCCAAAACAATCACAACCCGTACCCGCTACCAGAAACCCGTTTTTATATTACTCTTCTTAACAACGTCATCCAATTCACGCCACCAACTGACAAAAGCAAAGCAACCTCGTCACTCAACCAGCCCTTCTTTTCTCTTTTTCTCTATTCGGGTAAACGGATCGGGTAAGGGGGACCCGGAAATGGTGTCGGATGCGGAGCTGGTGAGTAGGCTCCGAGTAATACTGCAATCGTCGGACCTTCACACGACGACCGCCGGAGCCGTTCGCCGGCAACTCGAGAGCGACTTCGGTGTCGATTTGTCGGATCGGAAGAAGTTTGTTAGTCAGCAAATTGACGAGTTTCTTCAAAGTGTTAACGACGACAATGGAGAGGAAGAAGACGGTGAAGAAAATGTCGGCCAATTAGACGAACAACAAGCCGACGAAAATGGCGAACGAGAAGAAGAACAAGAAGAACAAGAAGAGGAAGAGGAGGAGGAAAGTGACGAGAAAAGTAGCAAGAGGAAAAGGTCGAAGGATGGCGAGGCAAATAAGAAAAGAAAAGCAACTGGTTTTACCAGATTATGCAGTCTTTCTCCACCATTACAGGAATTTCTTGGAGTTTCCGAGATGGCTCGAACTGAGGTGGTCAAACAACTCTGGGTCTACATCAGGGAGCATAATTTGCAAGATCCTAACAATAGACGTAATATAAAATGTGACAAGAAGTTGCACTCAGTTTTCCGAGTAGATACCATAAACATGTTCCAGATGAATAAAGCTCTCACCAAGCATATATGGCCACTTGAGGCGGAAGAAGAAACTGCAAGCAATTCTCAGCCTCAGGAGAAGAAGCAAAAGCGTCAGGAAGAACCTGCAACCAATTCGCAGCATCAGGAAAAGAAGCAAAAACATCAGAAAGAAGATGTGAAGAACTCCAAGCAGAAGTCGAAACAGCAGAAGGGGGGTACATCTGGTTTTCTTAAGCCCTTACAATTGTCAGATGCCTTTGTGAAGTTTCTTGGTACTGGTGAAACTTCCCTTTCCAGGTCAGATGCTGTCAAGAGAATGTGGGATTATATAAAGCAGAATGATCTCCAGGATCCTTCGGACAAGCGAAGAATTTTGTGTGACGAAAAGCTTAAGGAACTATTCGAGGTGGATTCCTTCACCGGATTTTCAGTTTCAAAGCTTCTGACTGCTCATCTTCTGAAAATAGAGCAATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_40287.p1 GENE.R_Transcript_40287~~R_Transcript_40287.p1 ORF type:5prime_partial len:435 (+),score=70.69,SWIB|PF02201.14|6e-31,SWIB|PF02201.14|1.4e-25,DEK_C|PF08766.7|1.7e-17 R_Transcript_40287:1-1305(+)
ITTFPSLLFRDFFLSSPFQIQTTNNKAHPQKPVSKTITTRTRYQKPVFILLFLTTSSNSRHQLTKAKQPRHSTSPSFLFFSIRVNGSGKGDPEMVSDAELVSRLRVILQSSDLHTTTAGAVRRQLESDFGVDLSDRKKFVSQQIDEFLQSVNDDNGEEEDGEENVGQLDEQQADENGEREEEQEEQEEEEEEESDEKSSKRKRSKDGEANKKRKATGFTRLCSLSPPLQEFLGVSEMARTEVVKQLWVYIREHNLQDPNNRRNIKCDKKLHSVFRVDTINMFQMNKALTKHIWPLEAEEETASNSQPQEKKQKRQEEPATNSQHQEKKQKHQKEDVKNSKQKSKQQKGGTSGFLKPLQLSDAFVKFLGTGETSLSRSDAVKRMWDYIKQNDLQDPSDKRRILCDEKLKELFEVDSFTGFSVSKLLTAHLLKIEQ*

Click here to download the sequence:
Link to NCBI Protein BLAST