Transcript Information: R_Transcript_40293.p1


Annotated TAIR IDAT3G19080.1
Annotated Gene NameSWIB complex BAF60b domain-containing protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:6596082-6598667 | Forward length=462
E-Value1.8E-90
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.5712314911406
Replicate 23.3472362982504
Replicate 34.0944410196021
Condition 2: 8 Hour
Replicate 13.7852544845983
Replicate 25.4011791886922
Replicate 35.6997811126819
Condition 3: 24 Hour
Replicate 15.0462812988432
Replicate 24.3684329203559
Replicate 34.8639343748661


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_40293.p1 GENE.R_Transcript_40293~~R_Transcript_40293.p1 ORF type:5prime_partial len:414 (+),score=59.45,SWIB|PF02201.14|5.6e-31,SWIB|PF02201.14|1.3e-25,DEK_C|PF08766.7|1.5e-17 R_Transcript_40293:1-1242(+)
ATCACCACCTTCCCTTCTCTCCTCTTTAGGGATTTTTTTTTGTCTTCCCCCTTCCAAATCCAAACGACAAACAACAAAGCCCATCCTCAAAAACCCGTTTCCAAAACAATCACAACCCGTACCCGCTACCAGAAACCCGTTTTTATATTACTCTTCTTAACAACGTCATCCAATTCACGCCACCAACTGACAAAAGCAAAGCAACCTCGTCACTCAACCAGCCCTTCTTTTCTCTTTTTCTCTATTCGGGTAAACGGATCGGGTAAGGGGGACCCGGAAATGGTGTCGGATGCGGAGCTGGTGAGTAGGCTCCGAGTAATACTGCAATCGTCGGACCTTCACACGACGACCGCCGGAGCCGTTCGCCGGCAACTCGAGAGCGACTTCGGTGTCGATTTGTCGGATCGGAAGAAGTTTGTTAGTCAGCAAATTGACGAGTTTCTTCAAAGTGTTAACGACGACAATGGAGAGGAAGAAGACGATGAAGAAAATGCCGACCAATTAGACGAACAACAAACCGACGAAAATGGCGAACAAGAAGAACAAGAAGAGGAAGAGGAGGAGGAAAGTGACGAGAAAAGTAGCAAGAGGAAAAGGTCGAAGGATGGCGAGGCAAATAAGAAAAGAAAAGCAACTGGTTTTACCAGATTATGCAGTCTTTCTCCACCATTACAGGAATTTCTTGGAGTTTCCGAGATGGCTCGAACTGAGGTGGTCAAACAACTCTGGGTCTACATCAGGGAGCATAATTTGCAAGATCCTAACAATAGACGTAATATAAAATGTGACAAGAAGTTGCACTCAGTTTTCCGAGTAGATACCATAAACATGTTCCAGATGAATAAAGCTCTCACCAAGCATATATGGCCACTTGAGGCGGAAGAAGAAACTGCAACCAATTCGCAGCATCAGGAAAAGAAGCAAAAACATCAGAAAGAAGATGTGAAGAACTCCAAGCAGAAGTCGAAACAGCAGAAGGGGGGTACATCTGGTTTTCTTAAGCCCTTACAATTGTCAGATGCCTTTGTGAAGTTTCTTGGTACTGGTGAAACTTCCCTTTCCAGGTCAGATGCTGTCAAGAGAATGTGGGATTATATAAAGCAGAATGATCTCCAGGATCCTTCGGACAAGCGAAGAATTTTGTGTGACGAAAAGCTTAAGGAACTATTCGAGGTGGATTCCTTCACCGGATTTTCAGTTTCAAAGCTTCTGACTGCTCATCTTCTGAAAATAGAGCAATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_40293.p1 GENE.R_Transcript_40293~~R_Transcript_40293.p1 ORF type:5prime_partial len:414 (+),score=59.45,SWIB|PF02201.14|5.6e-31,SWIB|PF02201.14|1.3e-25,DEK_C|PF08766.7|1.5e-17 R_Transcript_40293:1-1242(+)
ITTFPSLLFRDFFLSSPFQIQTTNNKAHPQKPVSKTITTRTRYQKPVFILLFLTTSSNSRHQLTKAKQPRHSTSPSFLFFSIRVNGSGKGDPEMVSDAELVSRLRVILQSSDLHTTTAGAVRRQLESDFGVDLSDRKKFVSQQIDEFLQSVNDDNGEEEDDEENADQLDEQQTDENGEQEEQEEEEEEESDEKSSKRKRSKDGEANKKRKATGFTRLCSLSPPLQEFLGVSEMARTEVVKQLWVYIREHNLQDPNNRRNIKCDKKLHSVFRVDTINMFQMNKALTKHIWPLEAEEETATNSQHQEKKQKHQKEDVKNSKQKSKQQKGGTSGFLKPLQLSDAFVKFLGTGETSLSRSDAVKRMWDYIKQNDLQDPSDKRRILCDEKLKELFEVDSFTGFSVSKLLTAHLLKIEQ*

Click here to download the sequence:
Link to NCBI Protein BLAST