Transcript Information: R_Transcript_402972.p1


Annotated TAIR IDAT5G37280.1
Annotated Gene NameRING/U-box superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:14761275-14761925 | Reverse length=216
E-Value4E-05
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.11776103841754
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20.2885275076282
Replicate 30.35132149587846
Condition 3: 24 Hour
Replicate 10.88868931204016
Replicate 20.28458398568487
Replicate 30.56484399191993


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_402972.p1 GENE.R_Transcript_402972~~R_Transcript_402972.p1 ORF type:complete len:155 (+),score=12.74,zf-RING_2|PF13639.2|6.3e+03,zf-RING_2|PF13639.2|4.2e-11,zf-rbx1|PF12678.3|3.2e-10,zf-C3HC4|PF00097.21|4.1e+03,zf-C3HC4|PF00097.21|5e-08,zf-C3HC4_2|PF13923.2|2.3e+02,zf-C3HC4_2|PF13923.2|2.8e-06,zf-ANAPC11|PF12861.3|4.7e-06 R_Transcript_402972:52-516(+)
ATGTCCATGATGGAGCTGCAACTGGAACGCCCCATATACAGCCCCTTAGCAACTTCACACATCCGGCCTTCAACATTATTCTTGGCCGTACTTGGTTCCTTTATTTTCACCCACACCATCCTCTTTCTCATCAAACTCTACCGTCGATTTTTCACCCCCTGCTGTTGTGAATTTGATGATCAGTTGGAGTTGGACACTGCATTGCTGCTGGTGGTTGATCCTCAAACTATCAACAAAGTGTCCGAGAATTGCACTCACTGCGCTATTTGCTTGGAAAGCTTAAACGACGACGTTGTTAGTAATAGTAATGGTTCTAACTGGGTGTTGAACCAATGTGGTCACAAGTTTCATCACAAGTGCCTTGCTGCTTGGTTTAACCTCGGCCGCCCAAGTTGTCCCCTTTGTCGCCGGAGCGTCCCTATCACGCGCCGCCCACATGATTTCATCAGGGTTGTCCATGTTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_402972.p1 GENE.R_Transcript_402972~~R_Transcript_402972.p1 ORF type:complete len:155 (+),score=12.74,zf-RING_2|PF13639.2|6.3e+03,zf-RING_2|PF13639.2|4.2e-11,zf-rbx1|PF12678.3|3.2e-10,zf-C3HC4|PF00097.21|4.1e+03,zf-C3HC4|PF00097.21|5e-08,zf-C3HC4_2|PF13923.2|2.3e+02,zf-C3HC4_2|PF13923.2|2.8e-06,zf-ANAPC11|PF12861.3|4.7e-06 R_Transcript_402972:52-516(+)
MSMMELQLERPIYSPLATSHIRPSTLFLAVLGSFIFTHTILFLIKLYRRFFTPCCCEFDDQLELDTALLLVVDPQTINKVSENCTHCAICLESLNDDVVSNSNGSNWVLNQCGHKFHHKCLAAWFNLGRPSCPLCRRSVPITRRPHDFIRVVHV*

Click here to download the sequence:
Link to NCBI Protein BLAST